RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 FAM170BA6NMN3 283 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ARNTLO00327 626 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 STK25O00506 426 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FAM189A1O60320 539 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 HIP1RO75146 1068 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 LMNAP02545 664 aaKnown RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 POU2F2P09086 479 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 HNRNPA1P09651 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 XBP1P17861 261 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 HOXA9P31269 272 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CCT6AP40227 531 aaKnown RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 VIPR2P41587 438 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 RBM25P49756 843 aaKnown RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 DMWDQ09019 674 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MLF2Q15773 248 aaPredicted RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MAPK6Q16659 721 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ARSHQ5FYA8 562 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TTC38Q5R3I4 469 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 STXBP5Q5T5C0 1151 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SLC8B1Q6J4K2 584 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 RINT1Q6NUQ1 792 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 STAMQ92783 540 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 NXPE3Q969Y0 559 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FAM84AQ96KN4 292 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 HEBP1Q9NRV9 189 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 DDX19AQ9NUU7 478 aaKnown RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 DLL3Q9NYJ7 618 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TUBGCP4Q9UGJ1 667 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TNFSF13BQ9Y275 285 aa9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TIMM13Q9Y5L4 95 aaPredicted RBP9.1□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MYH15Q9Y2K3 1946 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ARHGEF35A5YM69 484 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SPTLC1O15269 473 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SLC16A4O15374 487 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 KCNE1P15382 129 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 U2AF2P26368 475 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 GRM5P41594 1212 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PEX3P56589 373 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 GRIN1Q05586 938 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 RAD51AP2Q09MP3 1159 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MTAPQ13126 283 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PTGDRQ13258 359 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 GRM2Q14416 872 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ZBTB6Q15916 424 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 UVSSAQ2YD98 709 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PABPC1LQ4VXU2 614 aaKnown RBP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 SLC39A4Q6P5W5 647 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ZBTB8OSQ8IWT0 167 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TTC9BQ8N6N2 239 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ZBTB44Q8NCP5 570 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TMEM161BQ8NDZ6 487 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 WASF1Q92558 559 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 CHFRQ96EP1 664 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 TMEM209Q96SK2 561 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 PLIN2Q99541 437 aa9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 FOXP1Q9H334 677 aaPredicted RBP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 AVENQ9NQS1 362 aaPredicted RBP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
SCARNA20.3-201ENST00000516913 COL4A2P08572 1712 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 IGF2RP11717 2491 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TISP43B9A030 160 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 PODXLO00592 558 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 LILRB5O75023 590 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 NR1I2O75469 434 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 SOAT2O75908 522 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TNFSF9P41273 254 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 ARPP19P56211 112 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 WNT7BP56706 349 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 CSTF1Q05048 431 aaKnown RBP9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 NCBP1Q09161 790 aaKnown RBP9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 UBXN2BQ14CS0 331 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 ANKRD1Q15327 319 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 VITQ6UXI7 678 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 RNF19BQ6ZMZ0 732 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TPRG1Q6ZUI0 275 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TMC8Q8IU68 726 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 TCEAL8Q8IYN2 117 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 DEPTORQ8TB45 409 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 SHKBP1Q8TBC3 707 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 C8orf76Q96K31 380 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 FIZ1Q96SL8 496 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 CORO1BQ9BR76 489 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 NTPCRQ9BSD7 190 aaKnown RBP9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 C2orf40Q9H1Z8 148 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 ZNF334Q9HCZ1 680 aaPredicted RBP9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 CNTN3Q9P232 1028 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
SCARNA20.3-201ENST00000516913 KCNH3Q9ULD8 1083 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms