RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
SCARNA20-201ENST00000516768 UNC80Q8N2C7 3258 aa12.12□□□□□ -0.47
SCARNA20-201ENST00000516768 TRIP11Q15643 1979 aa12.12□□□□□ -0.47
SCARNA20-201ENST00000516768 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
SCARNA20-201ENST00000516768 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 PODXLO00592 558 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 C2CD2LO14523 706 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 EXTL3O43909 919 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 URODP06132 367 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 KLRC2P26717 231 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 CA8P35219 290 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 KCNQ1P51787 676 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 KCNB1Q14721 858 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 JADE1Q6IE81 842 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 LNX1Q8TBB1 728 aaPredicted RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 SLC22A17Q8WUG5 538 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 TMEM174Q8WUU8 243 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 B3GALT6Q96L58 329 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 UBE4BO95155 1302 aa12.11□□□□□ -0.47
SCARNA20-201ENST00000516768 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 ZNF233A6NK53 670 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 TEX28O15482 410 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 TBX10O75333 385 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 IL18RAPO95256 599 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 C1RP00736 705 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 FGFR3P22607 806 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 BRCC3P46736 316 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 NDUFV1P49821 464 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 CLCN4P51793 760 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 NT5DC4Q86YG4 428 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 C12orf56Q8IXR9 622 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 RIN2Q8WYP3 895 aaPredicted RBP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 PIK3R5Q8WYR1 880 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 FBXL18Q96ME1 805 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 S1PR5Q9H228 398 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 TUBGCP4Q9UGJ1 667 aa12.1□□□□□ -0.47
SCARNA20-201ENST00000516768 ANO9A1A5B4 782 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PIRO00625 290 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 CLIC2O15247 247 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 NFICP08651 508 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PAX3P23760 479 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 WNT7BP56706 349 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PNOCQ13519 176 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 MRPL58Q14197 206 aaKnown RBP12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 TMEM132DQ14C87 1099 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PDXDC1Q6P996 788 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 SYCE2Q6PIF2 218 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 TMEM130Q8N3G9 435 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 SMRP1Q8NCR6 262 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 CASP10Q92851 521 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 SUSD3Q96L08 255 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 CLSTN3Q9BQT9 956 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 KCTD10Q9H3F6 313 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 DMAC2Q9NW81 257 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 RBAKQ9NYW8 714 aaPredicted RBP12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 BARX2Q9UMQ3 279 aaPredicted RBP12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PCDHA5Q9Y5H7 936 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 CITO14578 2027 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 ATG2AQ2TAZ0 1938 aa12.09□□□□□ -0.47
SCARNA20-201ENST00000516768 PDXKO00764 312 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms