RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 AMPD3Q01432 767 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GRSF1Q12849 480 aaKnown RBP eCLIP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GAB1Q13480 694 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 MTM1Q13496 603 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 GALEQ14376 348 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KCNAB1Q14722 419 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ACAP2Q15057 778 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CHRNA2Q15822 529 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ADRM1Q16186 407 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 DDB1Q16531 1140 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 UGT8Q16880 541 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 INAVAQ3KP66 663 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ATP13A4Q4VNC1 1196 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ATXN7L2Q5T6C5 722 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KLHDC7AQ5VTJ3 777 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 AGAP9Q5VTM2 703 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RRAGBQ5VZM2 374 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KLHDC10Q6PID8 442 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KCNV1Q6PIU1 500 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 Q6ZNX1 250 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 EP400NLQ6ZTU2 488 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TFAP2DQ7Z6R9 452 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 YTHDF3Q7Z739 585 aaKnown RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 FAM124AQ86V42 546 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 VPS37DQ86XT2 251 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TRIM48Q8IWZ4 208 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 HOMEZQ8IX15 550 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NIM1KQ8IY84 436 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CKAP2LQ8IYA6 745 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 UNC5BQ8IZJ1 945 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 THEMISQ8N1K5 641 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CFAP52Q8N1V2 620 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TTC9BQ8N6N2 239 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 METTL25Q8N6Q8 603 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CNTD1Q8N815 330 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 C11orf44Q8N8P7 122 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ST13P5Q8NFI4 369 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PHOSPHO1Q8TCT1 267 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ADAMTS15Q8TE58 950 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 WFIKKN2Q8TEU8 576 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 WIPF2Q8TF74 440 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SCARB1Q8WTV0 552 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 THAP3Q8WTV1 239 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 STAG1Q8WVM7 1258 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CASKIN2Q8WXE0 1202 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RAPGEF4Q8WZA2 1011 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SLC5A5Q92911 643 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CAVIN3Q969G5 261 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RFKQ969G6 155 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 RUNDC1Q96C34 613 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SLC7A6OSQ96CW6 309 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IL17RAQ96F46 866 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 FAXDC2Q96IV6 333 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TMX3Q96JJ7 454 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PDLIM2Q96JY6 352 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 C5orf34Q96MH7 638 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 FOXB1Q99853 325 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ORAI3Q9BRQ5 295 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SCNM1Q9BWG6 230 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 BOCQ9BWV1 1114 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 APOL5Q9BWW9 433 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TTYH3Q9C0H2 523 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IFT122Q9HBG6 1241 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SEPSECSQ9HD40 501 aaKnown RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CASS4Q9NQ75 786 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ANLNQ9NQW6 1124 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CCM2LQ9NUG4 571 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 POLR3BQ9NW08 1133 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 DNAJC28Q9NX36 388 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TMEM260Q9NX78 707 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 STK32BQ9NY57 414 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NCKIPSDQ9NZQ3 722 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SH3BP4Q9P0V3 963 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PTGFRNQ9P2B2 879 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ARPP21Q9UBL0 812 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CPA4Q9UI42 421 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SERTAD3Q9UJW9 196 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PACSIN3Q9UKS6 424 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NOB1Q9ULX3 412 aaKnown RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 FZD1Q9UP38 647 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NOC2LQ9Y3T9 749 aaKnown RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CCDC9Q9Y3X0 531 aaKnown RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TBX22Q9Y458 520 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IPPQ9Y573 584 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ASB1Q9Y576 335 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PCDHB6Q9Y5E3 794 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SLC12A7Q9Y666 1083 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 SIRT4Q9Y6E7 314 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 CDY2AQ9Y6F7 541 aa0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TRIP12Q14669 1992 aaPredicted RBP0.5□□□□□ -2.33
RNU6-1049P-201ENST00000516414 PHLDB1Q86UU1 1377 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 ZNF521Q96K83 1311 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 WASHC2CQ9Y4E1 1318 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TRBV23OR9-2A0A075B6M9 112 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 TCRBV5S1A1TA0A578 114 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 KRTAP9-6A8MVA2 160 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 NT5C1B-RDH14C9J2C7 533 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 H7C1D1 291 aa0.49□□□□□ -2.33
RNU6-1049P-201ENST00000516414 M0QYT0 321 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms