RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 GTPBP4Q9BZE4 634 aaKnown RBP10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 GPR62Q9BZJ7 368 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 ASB7Q9H672 318 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 KIAA1586Q9HCI6 787 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 SLC38A7Q9NVC3 462 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 UBQLN1Q9UMX0 589 aaKnown RBP10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
SCARNA16-201ENST00000515981 BRWD1Q9NSI6 2320 aa10.52□□□□□ -0.72
SCARNA16-201ENST00000515981 SCN1AP35498 2009 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 CETN3O15182 167 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 B3GAT3O94766 335 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 TNNI1P19237 187 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 RPL13P26373 211 aaKnown RBP10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 PSMC2P35998 433 aaKnown RBP10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 BRCC3P46736 316 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 PLCB3Q01970 1234 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 KRT17Q04695 432 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 MYBPC2Q14324 1141 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 EDRF1Q3B7T1 1238 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 C1orf220Q5T0J3 134 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 C9orf57Q5W0N0 161 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 DCLRE1AQ6PJP8 1040 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 SASS6Q6UVJ0 657 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 FAM186BQ8IYM0 893 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 MLKLQ8NB16 471 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 BEST2Q8NFU1 509 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 RSPH1Q8WYR4 309 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 TMEM169Q96HH4 297 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 MTMR12Q9C0I1 747 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 FRMD4BQ9Y2L6 1034 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 PDCD11Q14690 1871 aaKnown RBP10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 PLXNA4Q9HCM2 1894 aa10.52□□□□□ -0.73
SCARNA16-201ENST00000515981 RALGAPA2Q2PPJ7 1873 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 SPTLC1O15269 473 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 TRIM49P0CI25 452 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 TRIM49CP0CI26 452 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 CYP3A5P20815 502 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 LRPAP1P30533 357 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 RPL9P32969 192 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 PPM1AP35813 382 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 FKBP3Q00688 224 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 POU5F1Q01860 360 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 LRRC63Q05C16 580 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 CCDC85BQ15834 202 aaPredicted RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 DUOXA2Q1HG44 320 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 FAM171A1Q5VUB5 890 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 PLPP4Q5VZY2 271 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 FUT10Q6P4F1 479 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 C11orf57Q6ZUT1 292 aaPredicted RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 DDX53Q86TM3 631 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 ZC3H3Q8IXZ2 948 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 VPS52Q8N1B4 723 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 CSGALNACT2Q8N6G5 542 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 CXorf38Q8TB03 319 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 MICAL1Q8TDZ2 1067 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 TMEM174Q8WUU8 243 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 PPM1EQ8WY54 764 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 DDX27Q96GQ7 796 aaKnown RBP10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 UROC1Q96N76 676 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 FNBP1Q96RU3 617 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 CGRRF1Q99675 332 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 MMRN2Q9H8L6 949 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 SIX4Q9UIU6 781 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 ADAM28Q9UKQ2 775 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 AGAP1Q9UPQ3 857 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 DERAQ9Y315 318 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 C2CD2Q9Y426 696 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 MTCH2Q9Y6C9 303 aa10.51□□□□□ -0.73
SCARNA16-201ENST00000515981 ANO9A1A5B4 782 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 BICDL2A1A5D9 508 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 SYCE3A1L190 88 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 HIDE1A8MVS5 230 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 PIRO00625 290 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 C2CD2LO14523 706 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 XPOTO43592 962 aaKnown RBP10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 CXCL14O95715 111 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 EFEMP2O95967 443 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 CST3P01034 146 aaPredicted RBP10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 TNNC2P02585 160 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 ITGB3P05106 788 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 KRT19P08727 400 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 TMEM191BP0C7N4 346 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 PTMSP20962 102 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 CA8P35219 290 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 PPP1R2P41236 205 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 VAMP7P51809 220 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 TYRO3Q06418 890 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 PPP3CAQ08209 521 aa10.5□□□□□ -0.73
SCARNA16-201ENST00000515981 SURF1Q15526 300 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms