RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TMEM39BQ9GZU3 492 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 AURKCQ9UQB9 309 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 STXBP3O00186 592 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 NCK2O43639 380 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 MAPK9P45984 424 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 POLE2P56282 527 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 C18orf8Q96DM3 657 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 MFSD1Q9H3U5 465 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 MIF4GDA9UHW6 222 aaKnown RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 UBA3Q8TBC4 463 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 SLITRK1Q96PX8 696 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 PNMA8BQ9ULN7 279 aaPredicted RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 FAM32AQ9Y421 112 aaKnown RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 TCF3P15923 654 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 RESTQ13127 1097 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 EPHA7Q15375 998 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 STRIP1Q5VSL9 837 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 PNKPQ96T60 521 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 CEP55Q53EZ4 464 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 C6orf10Q5SRN2 563 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 TSEN34Q9BSV6 310 aaKnown RBP11.59□□□□□ -0.55
TRIM41-209ENST00000515834 ZFATQ9P243 1243 aa11.59□□□□□ -0.55
TRIM41-209ENST00000515834 TARSL2A2RTX5 802 aaKnown RBP11.58□□□□□ -0.55
TRIM41-209ENST00000515834 PRR29P0C7W0 189 aa11.58□□□□□ -0.55
TRIM41-209ENST00000515834 DCAF6Q58WW2 860 aa11.58□□□□□ -0.55
TRIM41-209ENST00000515834 MDH1BQ5I0G3 518 aa11.58□□□□□ -0.55
TRIM41-209ENST00000515834 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.55
TRIM41-209ENST00000515834 BRD8Q9H0E9 1235 aa11.58□□□□□ -0.55
TRIM41-209ENST00000515834 ZC3H11AO75152 810 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PTPRN2Q92932 1015 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 COLEC11Q9BWP8 271 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 OSBPL10Q9BXB5 764 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 HSPBP1Q9NZL4 362 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PDGFRAP16234 1089 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 MED21Q13503 144 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 EZH2Q15910 746 aaKnown RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 XKR3Q5GH77 459 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 JADE3Q92613 823 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PANX2Q96RD6 677 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 RCOR1Q9UKL0 485 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 MFAP3LO75121 409 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 RGS2P41220 211 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 OCA2Q04671 838 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 EMC2Q15006 297 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 ATF7IP2Q5U623 682 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 GOLGA8RI6L899 631 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 SEC24DO94855 1032 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 ENDOD1O94919 500 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 NCAM1P13591 858 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 TAP1Q03518 808 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PLCL1Q15111 1095 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 ANKS6Q68DC2 871 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PLEKHM3Q6ZWE6 761 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 SPASTQ9UBP0 616 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 RNASEH1O60930 286 aaKnown RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 SKIP12755 728 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 GTF2A2P52657 109 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 NCOA4Q13772 614 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 GOLGA7BQ2TAP0 167 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 C9orf131Q5VYM1 1079 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 SHCBP1Q8NEM2 672 aa11.58□□□□□ -0.56
TRIM41-209ENST00000515834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 CINPQ9BW66 212 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 OSBPL5Q9H0X9 879 aaPredicted RBP11.58□□□□□ -0.56
TRIM41-209ENST00000515834 MAGEB2O15479 319 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 KDM1AO60341 852 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 SYNCRIPO60506 623 aaKnown RBP11.57□□□□□ -0.56
TRIM41-209ENST00000515834 APRTP07741 180 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 PMS2P54278 862 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 ANKRD13AQ8IZ07 590 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 CARNMT1Q8N4J0 409 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 TMEM60Q9H2L4 133 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 MRPL40Q9NQ50 206 aaKnown RBP11.57□□□□□ -0.56
TRIM41-209ENST00000515834 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 CHRM3P20309 590 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 SLC16A1P53985 500 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 GRIN1Q05586 938 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 IZUMO3Q5VZ72 239 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 ENOSF1Q7L5Y1 443 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 CFAP99D6REC4 459 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 USP11P51784 963 aa11.57□□□□□ -0.56
TRIM41-209ENST00000515834 KPNA1P52294 538 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms