RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TBX3O15119 743 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
CLDND1-231ENST00000515620 PRKCBP05771 671 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 GJA1P17302 382 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 MPLP40238 635 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 ARPP19P56211 112 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 ZNF252P-AS1Q0IIN9 211 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 EPHA7Q15375 998 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 GLRA4Q5JXX5 417 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 RNF43Q68DV7 783 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 NCAPH2Q6IBW4 605 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 TCEAL6Q6IPX3 200 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 Q6ZUG5 572 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 BLIDQ8IZY5 108 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 FAM200AQ8TCP9 573 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 GAB3Q8WWW8 586 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 MSANTD3Q96H12 275 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 LOXL4Q96JB6 756 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 POLR3FQ9H1D9 316 aaPredicted RBP11.6□□□□□ -0.55
CLDND1-231ENST00000515620 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 ZSWIM4Q9H7M6 989 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 CYP4F11Q9HBI6 524 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 KCNMB3Q9NPA1 279 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 INSL5Q9Y5Q6 135 aa11.6□□□□□ -0.55
CLDND1-231ENST00000515620 TMEM8BA6NDV4 472 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 SRRM3A6NNA2 597 aaPredicted RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 SOBPA7XYQ1 873 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 HEPACAM2A8MVW5 462 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TMEM189-UBE2V1I3L0A0 370 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 MICAL2O94851 1124 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 CCDC192P0DO97 292 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 MYL4P12829 197 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 HOXA6P31267 233 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 ARL2P36404 184 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 BRCC3P46736 316 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 RAP1GAPP47736 663 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 PXNP49023 591 aaPredicted RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 KRT32Q14532 448 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 DGKKQ5KSL6 1271 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 PLA2G2CQ5R387 149 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 CYP4A22Q5TCH4 519 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 SLC8B1Q6J4K2 584 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 C1orf228Q6PIY5 440 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TXNDC11Q6PKC3 985 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 CACNA2D4Q7Z3S7 1137 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 MFSD6LQ8IWD5 586 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 HS6ST3Q8IZP7 471 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 ELMOD1Q8N336 334 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 C3orf58Q8NDZ4 430 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 ZNF461Q8TAF7 563 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TTC8Q8TAM2 541 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 EDEM2Q9BV94 578 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 PDZD7Q9H5P4 517 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 C8orf33Q9H7E9 229 aaPredicted RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 GOLGA2P5Q9HBQ8 144 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
CLDND1-231ENST00000515620 LHX6Q9UPM6 363 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 GDAQ9Y2T3 454 aa11.59□□□□□ -0.55
CLDND1-231ENST00000515620 SDK1Q7Z5N4 2213 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 SPECC1L-ADORA2AF8WAN1 911 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 M0R2N6 131 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 N4BP3O15049 544 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TRAPPC3O43617 180 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 EXTL3O43909 919 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 MARCH6O60337 910 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 MOSPD3O75425 235 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 DGAT1O75907 488 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 ABLIM3O94929 683 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 SEC24AO95486 1093 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TOP3BO95985 862 aaKnown RBP11.58□□□□□ -0.56
CLDND1-231ENST00000515620 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
CLDND1-231ENST00000515620 IFNAR1P17181 557 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 CTHP32929 405 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 CLCNKBP51801 687 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 MLLT6P55198 1093 aaPredicted RBP11.58□□□□□ -0.56
CLDND1-231ENST00000515620 RING1Q06587 406 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 PON2Q15165 354 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TEAD2Q15562 447 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TCEAL8Q8IYN2 117 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 ZCCHC14Q8WYQ9 949 aaKnown RBP11.58□□□□□ -0.56
CLDND1-231ENST00000515620 RSPRY1Q96DX4 576 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 PRIMPOLQ96LW4 560 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 TRPV4Q9HBA0 871 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 ASAH2Q9NR71 780 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 VPS45Q9NRW7 570 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 PCDHGA5Q9Y5G8 931 aa11.58□□□□□ -0.56
CLDND1-231ENST00000515620 PDCD11Q14690 1871 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms