RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 KLHL5Q96PQ7 755 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 TTPALQ9BTX7 342 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 PLEKHA5Q9HAU0 1116 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 CD207Q9UJ71 328 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 SSX2IPQ9Y2D8 614 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 HCFC2Q9Y5Z7 792 aa12.52□□□□□ -0.41
SUB1-213ENST00000515355 DLL1O00548 723 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 EIF3DO15371 548 aaKnown RBP eCLIP12.51□□□□□ -0.413e-10■□□□□ 8.4
SUB1-213ENST00000515355 TEX28O15482 410 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 KLRC4O43908 158 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 ADH1AP07327 375 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 NFICP08651 508 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 IL9P15248 144 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 EPCAMP16422 314 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 GARTP22102 1010 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 CYP2J2P51589 502 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 ARPP19P56211 112 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 TFAMQ00059 246 aaKnown RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 DSG1Q02413 1049 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 ELAVL2Q12926 359 aaKnown RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 STK4Q13043 487 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 C12orf76Q8N812 135 aaPredicted RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 C3orf58Q8NDZ4 430 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 KCNN1Q92952 543 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 CLEC1BQ9P126 229 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 UBQLN1Q9UMX0 589 aaKnown RBP12.51□□□□□ -0.41
SUB1-213ENST00000515355 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
SUB1-213ENST00000515355 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 FAM189A1O60320 539 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 LDHAP00338 332 aaKnown RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 BMP1P13497 986 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 TKTP29401 623 aaKnown RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 PSMD2Q13200 908 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 PNOCQ13519 176 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 PSMD5Q16401 504 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 KIAA0319Q5VV43 1072 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 DSTYKQ6XUX3 929 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 CD302Q8IX05 232 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 CASP10Q92851 521 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 COL25A1Q9BXS0 654 aaPredicted RBP12.5□□□□□ -0.41
SUB1-213ENST00000515355 CHST7Q9NS84 486 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
SUB1-213ENST00000515355 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 GRXCR2A6NFK2 248 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 EXTL3O43909 919 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 LILRB3O75022 631 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 CLSTN1O94985 981 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 IL18RAPO95256 599 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 MYL1P05976 194 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 WEE2P0C1S8 567 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 HOXD13P35453 343 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 DPYDQ12882 1025 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 KNOP1Q1ED39 458 aaKnown RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 LMBRD2Q68DH5 695 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 CRELD2Q6UXH1 353 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 CBWD2Q8IUF1 395 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 FAM84AQ96KN4 292 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 ASB7Q9H672 318 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.49□□□□□ -0.413e-6■□□□□ 8.9
SUB1-213ENST00000515355 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
SUB1-213ENST00000515355 IRAK3Q9Y616 596 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 TCHHQ07283 1943 aa12.49□□□□□ -0.41
SUB1-213ENST00000515355 ZNF233A6NK53 670 aa12.48□□□□□ -0.41
SUB1-213ENST00000515355 PPEF2O14830 753 aa12.48□□□□□ -0.41
SUB1-213ENST00000515355 TGFB1I1O43294 461 aa12.48□□□□□ -0.41
SUB1-213ENST00000515355 MBTPS2O43462 519 aa12.48□□□□□ -0.41
SUB1-213ENST00000515355 EXOC3O60645 756 aa12.48□□□□□ -0.41
SUB1-213ENST00000515355 KINO60870 393 aaKnown RBP12.48□□□□□ -0.41
SUB1-213ENST00000515355 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
SUB1-213ENST00000515355 GLUD1P00367 558 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms