RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 PSMD6Q15008 389 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 ACBD5Q5T8D3 534 aaPredicted RBP7.9□□□□□ -1.14
CCDC30-214ENST00000514642 CPB2Q96IY4 423 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 C11orf70Q9BRQ4 267 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 FBXO28Q9NVF7 368 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 GHRP10912 638 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 ZBED6P86452 979 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 NFIAQ12857 509 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 RESTQ13127 1097 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 RBBP7Q16576 425 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 UBR1Q8IWV7 1749 aa7.9□□□□□ -1.14
CCDC30-214ENST00000514642 PRR23AA6NEV1 266 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 TTC4O95801 387 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 GARTP22102 1010 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 CASP14P31944 242 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 CUL1Q13616 776 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 ADGRF2Q8IZF7 708 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 MRFAP1L1Q96HT8 127 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 POC1B-GALNT4F8VUJ3 575 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 RNF40O75150 1001 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 SYF2O95926 243 aaKnown RBP7.9□□□□□ -1.15
CCDC30-214ENST00000514642 CENPUQ71F23 418 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 DSG4Q86SJ6 1040 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 ZNF557Q8N988 423 aaPredicted RBP7.9□□□□□ -1.15
CCDC30-214ENST00000514642 MRIQ9BWK5 157 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 IDI2Q9BXS1 227 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 C11orf49Q9H6J7 331 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 AGO4Q9HCK5 861 aaKnown RBP7.9□□□□□ -1.15
CCDC30-214ENST00000514642 VPS18Q9P253 973 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.15
CCDC30-214ENST00000514642 A0A087WWV3 80 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NPHP3-ACAD11A0A0J9YXS1 232 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 UBA6A0AVT1 1052 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 TM4SF1P30408 202 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NMT1P30419 496 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RBL2Q08999 1139 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 DDX41Q9UJV9 622 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RIC1Q4ADV7 1423 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RPTORQ8N122 1335 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 SLC9A3R1O14745 358 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 PGM5Q15124 567 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 KRT71Q3SY84 523 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NAA35Q5VZE5 725 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MORC4Q8TE76 937 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NUP85Q9BW27 656 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NHEJ1Q9H9Q4 299 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MAN1C1Q9NR34 630 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 SENP1Q9P0U3 644 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 PCDHA13Q9Y5I0 950 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MED1Q15648 1581 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 HIST1H2AGP0C0S8 130 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 HIST1H2ADP20671 130 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 HADHAP40939 763 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ATP2C1P98194 919 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ATP11AP98196 1134 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 TOB2Q14106 344 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ANGPTL8Q6UXH0 198 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ADCK2Q7Z695 626 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MFN1Q8IWA4 741 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MGARPQ8TDB4 240 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 HIST1H2AHQ96KK5 128 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 HIST1H2AJQ99878 128 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 H2AFJQ9BTM1 129 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 IQANK1A0A1B0GTG1 560 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 FAM95CA0A1B0GW59 222 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 EFCAB8A8MWE9 144 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ASS1P00966 412 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 CLCN3P51790 818 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 BEX3Q00994 111 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 SNRNP35Q16560 246 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 C18orf8Q96DM3 657 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 EEF2KMTQ96G04 330 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 C1QTNF7Q9BXJ2 289 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RCOR1Q9UKL0 485 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RTN3O95197 1032 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ITGB3P05106 788 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 EIF4A3P38919 411 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ADCYAP1R1P41586 468 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 MRPS6P82932 125 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 SGCGQ13326 291 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 NFE2Q16621 373 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ATP8B4Q8TF62 1192 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 CAMKK2Q96RR4 588 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ALDH8A1Q9H2A2 487 aaPredicted RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 PCSK1NQ9UHG2 260 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ZMYM2Q9UBW7 1377 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 TBC1D12O60347 775 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 ATP1A1P05023 1023 aaKnown RBP7.89□□□□□ -1.15
CCDC30-214ENST00000514642 UNC45BQ8IWX7 931 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 RAPGEF5Q92565 580 aa7.89□□□□□ -1.15
CCDC30-214ENST00000514642 SELENONQ9NZV5 590 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms