RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SLC39A4Q6P5W5 647 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 PRSS33Q8NF86 280 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 CLIC6Q96NY7 704 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 MYADMQ96S97 322 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 ST6GALNAC4Q9H4F1 302 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 PLEKHA5Q9HAU0 1116 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 KCNK12Q9HB15 430 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 PIDD1Q9HB75 910 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 IGSF9Q9P2J2 1179 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 CDY1Q9Y6F8 540 aa11.41□□□□□ -0.58
HMGXB3-205ENST00000514469 ZNF318Q5VUA4 2279 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 A0A0B4J269 797 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 OGTO15294 1046 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 STX6O43752 255 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 ADRB2P07550 413 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 NMT1P30419 496 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 LRPAP1P30533 357 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 TXLNAP40222 546 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 NASPP49321 788 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 PPP2R3AQ06190 1150 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 TDGQ13569 410 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 ENOX2Q16206 610 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 PPM1LQ5SGD2 360 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 ZBTB41Q5SVQ8 909 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 IER5LQ5T953 404 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 RTL10Q7L3V2 364 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 GET4Q7L5D6 327 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 SNX21Q969T3 373 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 SUSD3Q96L08 255 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 USP28Q96RU2 1077 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.4□□□□□ -0.58
HMGXB3-205ENST00000514469 MYH11P35749 1972 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 MUC6Q6W4X9 2439 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 MTCL1Q9Y4B5 1905 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 WDR27A2RRH5 827 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 CCL16O15467 120 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 XYLBO75191 536 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 PPP1R37O75864 691 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 CYP3A5P20815 502 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 FSHRP23945 695 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 ROR1Q01973 937 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 SLC39A14Q15043 492 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 ZBTB6Q15916 424 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 AXDND1Q5T1B0 1012 aaPredicted RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 GRASPQ7Z6J2 395 aaPredicted RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 KRI1Q8N9T8 703 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 HVCN1Q96D96 273 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 TSPAN18Q96SJ8 248 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 PRRX2Q99811 253 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 MSTO1Q9BUK6 570 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 ZHX3Q9H4I2 956 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 CPSF3Q9UKF6 684 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 NUB1Q9Y5A7 615 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 STYXL1Q9Y6J8 313 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 ZFP37Q9Y6Q3 630 aaPredicted RBP11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
HMGXB3-205ENST00000514469 A0A087X0B3 334 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 MYMKA6NI61 221 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 LACTBL1A8MY62 500 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ANHXE9PGG2 379 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 H7C4K7 107 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 M0QZQ0 153 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 NARSO43776 548 aaKnown RBP11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ABLIM3O94929 683 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 LAMP2P13473 410 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 AVPR2P30518 371 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 MCM4P33991 863 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 AARSP49588 968 aaKnown RBP eCLIP11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 NUBP1P53384 320 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 PTPN5P54829 565 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 NTHL1P78549 312 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 SPAG1Q07617 926 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 TCF15Q12870 199 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 HTR4Q13639 388 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ZC2HC1CQ53FD0 456 aaPredicted RBP11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 RRAGBQ5VZM2 374 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 CWF19L1Q69YN2 538 aaKnown RBP11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ZNF280DQ6N043 979 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 DYMQ7RTS9 669 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 ZNF720Q7Z2F6 126 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 CD302Q8IX05 232 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
HMGXB3-205ENST00000514469 DDX12PQ92771 950 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms