RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 GPR32O75388 356 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 TNNC2P02585 160 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 VTNP04004 478 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 CYP1A1P04798 512 aaPredicted RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 CYP1A2P05177 515 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 RPLP2P05387 115 aaKnown RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 STAG3L1P0CL83 205 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 GNAT1P11488 350 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 UNGP13051 313 aaPredicted RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 CYBAP13498 195 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 ARF4P18085 180 aaPredicted RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 CTGFP29279 349 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 ATICP31939 592 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 GRM5P41594 1212 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 ZNF132P52740 706 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 NAP1L1P55209 391 aaKnown RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 YWHAEP62258 255 aaKnown RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 NOP14P78316 857 aaKnown RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 GPC5P78333 572 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 ACAD10Q6JQN1 1059 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 SLC47A2Q86VL8 602 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 PALB2Q86YC2 1186 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 MMGT1Q8N4V1 131 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 SLC35G2Q8TBE7 412 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 RUBCNQ92622 972 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 ANKRD36BP1Q96IX9 119 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 VCPIP1Q96JH7 1222 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 PBKQ96KB5 322 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 MMS19Q96T76 1030 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 PCDHB18PQ96TA0 734 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 GCOM2Q9BZD3 368 aaPredicted RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 PLEKHA5Q9HAU0 1116 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 APOBEC3GQ9HC16 384 aaKnown RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
RNF4-220ENST00000513578 SETD4Q9NVD3 440 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 GTF3C4Q9UKN8 822 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 RAB21Q9UL25 225 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 DERAQ9Y315 318 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 C2CD2Q9Y426 696 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 NUB1Q9Y5A7 615 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 TARSL2A2RTX5 802 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 ATP8B1O43520 1251 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 ERLIN2O94905 339 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 KIF4AO95239 1232 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 CST3P01034 146 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 FTLP02792 175 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 TMEM191BP0C7N4 346 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 MYBL1P10243 752 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 HARSP12081 509 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 USP8P40818 1118 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 NOP2P46087 812 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 LACTBP83111 547 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 PURAQ00577 322 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 BRD3Q15059 726 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 RPS6KA1Q15418 735 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 FSCN1Q16658 493 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 CLEC16AQ2KHT3 1053 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 CFAP221Q4G0U5 840 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 SEZ6Q53EL9 994 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 TEX35Q5T0J7 233 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 LMBRD2Q68DH5 695 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 C11orf63Q6NUN7 778 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 EFCAB13Q8IY85 973 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 THNSL1Q8IYQ7 743 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 TTC39CQ8N584 583 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 CXorf38Q8TB03 319 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 HNRNPLLQ8WVV9 542 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 NLRP7Q8WX94 980 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 ZBTB10Q96DT7 871 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 TRIM11Q96F44 468 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 HES6Q96HZ4 224 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 RPS6KC1Q96S38 1066 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 ADPGKQ9BRR6 497 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 NIF3L1Q9GZT8 377 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 XYLT2Q9H1B5 865 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 ARGLU1Q9NWB6 273 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 TAS2R14Q9NYV8 317 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 UVRAGQ9P2Y5 699 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 TTC7AQ9ULT0 858 aaPredicted RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 ABT1Q9ULW3 272 aaKnown RBP8.97□□□□□ -0.97
RNF4-220ENST00000513578 MROH7Q68CQ1 1323 aa8.97□□□□□ -0.97
RNF4-220ENST00000513578 C17orf102A2RUQ5 167 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CCDC151A5D8V7 595 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 LACTBL1A8MY62 500 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 PDE2AO00408 941 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 MEFVO15553 781 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 SRGAP2O75044 1071 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 MMEP08473 750 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 MYL3P08590 195 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CXCL8P10145 99 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CYP2C9P11712 490 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 KRT5P13647 590 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 DARSP14868 501 aaKnown RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 ZSCAN20P17040 1043 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 MCM3P25205 808 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms