RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 CNTNAP3BQ96NU0 1288 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 NACC1Q96RE7 527 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ADPGKQ9BRR6 497 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 CNTNAP3Q9BZ76 1288 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 PARD6AQ9NPB6 346 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 GDE1Q9NZC3 331 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 NCDNQ9UBB6 729 aa10.61□□□□□ -0.71
TCOF1-212ENST00000513538 ARHGEF35A5YM69 484 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 MOSPD3O75425 235 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 RPA1P27694 616 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 MAGEA9P43362 315 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 GUCY1B3Q02153 619 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ATF7IP2Q5U623 682 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ALKAL1Q6UXT8 129 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ANKS3Q6ZW76 656 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 RTL10Q7L3V2 364 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ZNF461Q8TAF7 563 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ELSPBP1Q96BH3 223 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 ZSWIM3Q96MP5 696 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 CDT1Q9H211 546 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 CHRDQ9H2X0 955 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
TCOF1-212ENST00000513538 NDRG2Q9UN36 371 aaKnown RBP10.6□□□□□ -0.71
TCOF1-212ENST00000513538 EPG5Q9HCE0 2579 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 RALGAPA1Q6GYQ0 2036 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 PODXLO00592 558 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ABLIM1O14639 778 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 KRT37O76014 449 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 PTPN2P17706 415 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 GRM5P41594 1212 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 OSTNP61366 133 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ADCY1Q08828 1119 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ZNF174Q15697 407 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 WDR44Q5JSH3 913 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 VITQ6UXI7 678 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ZNF852Q6ZMS4 543 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 DAW1Q8N136 415 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 DNASE1L2Q92874 299 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 C18orf25Q96B23 403 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-212ENST00000513538 UROC1Q96N76 676 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ASB16Q96NS5 453 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 NELL2Q99435 816 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 CORO1BQ9BR76 489 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 BHMT2Q9H2M3 363 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 CEP72Q9P209 647 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 INSL5Q9Y5Q6 135 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 ANK1P16157 1881 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 KIF26AQ9ULI4 1882 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-212ENST00000513538 MYH11P35749 1972 aa10.59□□□□□ -0.71
TCOF1-212ENST00000513538 KMT2BQ9UMN6 2715 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ACACBO00763 2458 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 DCDC2BA2VCK2 349 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ARNTLO00327 626 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 PRRG1O14668 218 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 VNN2O95498 520 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 LRG1P02750 347 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ATF2P15336 505 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 GJA1P17302 382 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 PROZP22891 400 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 HOXC13P31276 330 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 VIPR2P41587 438 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 EFNA5P52803 228 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ARPP19P56211 112 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ANAPC15P60006 121 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 GAS6Q14393 721 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 NBR1Q14596 966 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 LPAL2Q16609 132 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ERICH6BQ5W0A0 696 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 C4orf32Q8N8J7 132 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 RSPRY1Q96DX4 576 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 TARS2Q9BW92 718 aaKnown RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 BRD9Q9H8M2 597 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 CYP4F11Q9HBI6 524 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 ZNF334Q9HCZ1 680 aaPredicted RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 TSC2P49815 1807 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 MAP1BP46821 2468 aaKnown RBP10.58□□□□□ -0.72
TCOF1-212ENST00000513538 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
TCOF1-212ENST00000513538 NUP210Q8TEM1 1887 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-212ENST00000513538 SYN3O14994 580 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 NCAM2O15394 837 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 TRAPPC3O43617 180 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 KCNE1P15382 129 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 GDI1P31150 447 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 CCT6AP40227 531 aaKnown RBP10.57□□□□□ -0.72
TCOF1-212ENST00000513538 NPTX2P47972 431 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 SATB1Q01826 763 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 LMNB2Q03252 620 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 DMWDQ09019 674 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 MAPK7Q13164 816 aa10.57□□□□□ -0.72
TCOF1-212ENST00000513538 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms