RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CEP57Q86XR8 500 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 MARCH9Q86YJ5 346 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 ZFYVE19Q96K21 471 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 TPSD1Q9BZJ3 242 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 CAPN10Q9HC96 672 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 ZSWIM5Q9P217 1185 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 PILRBQ9UKJ0 227 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 ITPR2Q14571 2701 aa10.51□□□□□ -0.73
CLCN3-208ENST00000512813 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
CLCN3-208ENST00000512813 TRDMT1O14717 391 aaKnown RBP10.5□□□□□ -0.73
CLCN3-208ENST00000512813 DHX15O43143 795 aaKnown RBP10.5□□□□□ -0.73
CLCN3-208ENST00000512813 TLX3O43711 291 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-208ENST00000512813 CBFA2T3O75081 653 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 SERPINF2P08697 491 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 PTGER3P43115 390 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 EPHA5P54756 1037 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 RHDQ02161 417 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 SEC23AQ15436 765 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 DUOXA1Q1HG43 343 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 CYP4A22Q5TCH4 519 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 RASSF3Q86WH2 238 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 LEMD2Q8NC56 503 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 OR2I1PQ8NGU4 316 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 CEP76Q8TAP6 659 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 PI4K2BQ8TCG2 481 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 RABGGTAQ92696 567 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 ACDQ96AP0 544 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 CNOT6LQ96LI5 555 aaKnown RBP10.5□□□□□ -0.73
CLCN3-208ENST00000512813 ARID3AQ99856 593 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 UBAC1Q9BSL1 405 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 GPR88Q9GZN0 384 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 PSTPIP2Q9H939 334 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 IPPQ9Y573 584 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 PCDHA8Q9Y5H6 950 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 TTC41PQ6P2S7 1318 aa10.5□□□□□ -0.73
CLCN3-208ENST00000512813 FBN3Q75N90 2809 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 MEIS1O00470 390 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 ARHGAP33O14559 1287 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 MAFO75444 373 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-208ENST00000512813 EGFP01133 1207 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 OATP04181 439 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 HLA-EP13747 358 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 HOXA11P31270 313 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-208ENST00000512813 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 TNK2Q07912 1038 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 ELAVL2Q12926 359 aaKnown RBP10.49□□□□□ -0.73
CLCN3-208ENST00000512813 GRIK3Q13003 919 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 SERINC3Q13530 473 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 PTPAQ15257 358 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 ITPRIPL2Q3MIP1 535 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 FBXO43Q4G163 708 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 LYSMD4Q5XG99 296 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 ARMCX6Q7L4S7 300 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 SMAP1Q8IYB5 467 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-208ENST00000512813 GSTCDQ8NEC7 633 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 TSTD1Q8NFU3 115 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 RPLP0P6Q8NHW5 317 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 HASPINQ8TF76 798 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 PIBF1Q8WXW3 757 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 SLITRK6Q9H5Y7 841 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 GABBR1Q9UBS5 961 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
CLCN3-208ENST00000512813 NUP210Q8TEM1 1887 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-208ENST00000512813 PTPRDP23468 1912 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PRRG1O14668 218 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 KIF4AO95239 1232 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PSAPP07602 524 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 GJA1P17302 382 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 CXADRP78310 365 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PRKCEQ02156 737 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 TEAD2Q15562 447 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-208ENST00000512813 ZNF574Q6ZN55 896 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 RHPN2Q8IUC4 686 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 OLIG1Q8TAK6 271 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 BAP1Q92560 729 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 NXPE2Q96DL1 559 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 CHFRQ96EP1 664 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 LRRC3BQ96PB8 259 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PAAF1Q9BRP4 392 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 IFT122Q9HBG6 1241 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 OBP2AQ9NY56 170 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PCOLCE2Q9UKZ9 415 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PCDHA10Q9Y5I2 948 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 INSL5Q9Y5Q6 135 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 PLXND1Q9Y4D7 1925 aa10.48□□□□□ -0.73
CLCN3-208ENST00000512813 MYO16Q9Y6X6 1858 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 LRBAP50851 2863 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 IGKV6-21A0A0C4DH24 114 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ZNF213O14771 459 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ANP32CO43423 234 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms