RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 THP07101 528 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 KRT19P08727 400 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CYP3A5P20815 502 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 MYO1EQ12965 1108 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 GRIK3Q13003 919 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 NCOA4Q13772 614 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 XKR4Q5GH76 650 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CBWD3Q5JTY5 395 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CBWD5Q5RIA9 395 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 C1orf220Q5T0J3 134 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 LMBRD2Q68DH5 695 aaPredicted RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 ALKAL1Q6UXT8 129 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 FMNL3Q8IVF7 1028 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 TAF4BQ92750 862 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 BADQ92934 168 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 LPPQ93052 612 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 GAD1Q99259 594 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 INTS2Q9H0H0 1204 aaKnown RBP11.71□□□□□ -0.53
PFDN1-204ENST00000512707 PLCB1Q9NQ66 1216 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 DPP3Q9NY33 737 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.53
PFDN1-204ENST00000512707 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 PTPRJQ12913 1337 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 HLA-DRAP01903 254 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 FGBP02675 491 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 P4HA1P13674 534 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 ITGB8P26012 769 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 ATICP31939 592 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 PNPLA4P41247 253 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 RBP5P82980 135 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 SGSM1Q2NKQ1 1148 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 EPC2Q52LR7 807 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 NOMO2Q5JPE7 1267 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 GLRA4Q5JXX5 417 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 TDRD10Q5VZ19 366 aaKnown RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 AGMOQ6ZNB7 445 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 C15orf39Q6ZRI6 1047 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 RTN4RL1Q86UN2 441 aaPredicted RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 OR5B17Q8NGF7 314 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 LINC01599Q8WXQ3 324 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 ZNF560Q96MR9 790 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 UROC1Q96N76 676 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 NT5C1BQ96P26 610 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 FAM193BQ96PV7 902 aaPredicted RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 FAM207AQ9NSI2 230 aaPredicted RBP11.7□□□□□ -0.54
PFDN1-204ENST00000512707 COQ4Q9Y3A0 265 aa11.7□□□□□ -0.54
PFDN1-204ENST00000512707 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 INPPL1O15357 1258 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 NRDCO43847 1150 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 ITGB3P05106 788 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 PAX3P23760 479 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 PON1P27169 355 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 PBX1P40424 430 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 SCNN1GP51170 649 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 MFAP3P55082 362 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 WNT7BP56706 349 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 GSDMDP57764 484 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
PFDN1-204ENST00000512707 ZNF699Q32M78 642 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 ENOSF1Q7L5Y1 443 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 CNGA4Q8IV77 575 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 TAS1R2Q8TE23 839 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 ZNF516Q92618 1163 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
PFDN1-204ENST00000512707 EDEM3Q9BZQ6 932 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 DNAI2Q9GZS0 605 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 NUCKS1Q9H1E3 243 aaKnown RBP11.69□□□□□ -0.54
PFDN1-204ENST00000512707 CEP72Q9P209 647 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
PFDN1-204ENST00000512707 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
PFDN1-204ENST00000512707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 PTGESO14684 152 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 OFD1O75665 1012 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 POMCP01189 267 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 ACRP10323 421 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 FGFR1P11362 822 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 SYN1P17600 705 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 SLC9A1P19634 815 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms