RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 NUB1Q9Y5A7 615 aa12.69□□□□□ -0.38
PRDM16-207ENST00000512462 CYP2C8P10632 490 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 PYGMP11217 842 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 GPC3P51654 580 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 SLFN12LQ6IEE8 588 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 GPAT2Q6NUI2 795 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 IRF2BP2Q7Z5L9 587 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 C4orf33Q8N1A6 199 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 SEPT1Q8WYJ6 367 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 SNX9Q9Y5X1 595 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 IGKV6D-41A0A0C4DH26 115 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 RASA4BC9J798 803 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 RASA4O43374 803 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
PRDM16-207ENST00000512462 EZRP15311 586 aaKnown RBP12.68□□□□□ -0.38
PRDM16-207ENST00000512462 SLC8A3P57103 927 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 NEDD9Q14511 834 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
PRDM16-207ENST00000512462 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
PRDM16-207ENST00000512462 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 TMEM8AQ9HCN3 771 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 KLK14Q9P0G3 267 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 INPP5FQ9Y2H2 1132 aa12.68□□□□□ -0.38
PRDM16-207ENST00000512462 E2F8A0AVK6 867 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CTSHP09668 335 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 ARSEP51690 589 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 MYL6P60660 151 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 ATP13A4Q4VNC1 1196 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CEP120Q8N960 986 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 SEMA4AQ9H3S1 761 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 FNDC3AQ9Y2H6 1198 aaKnown RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 NR2E1Q9Y466 385 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 NID2Q14112 1375 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 DYNC1LI2O43237 492 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CCNE2O96020 404 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 BRAFP15056 766 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 OSBPP22059 807 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CPB2Q96IY4 423 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 SAE1Q9UBE0 346 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 G3BP2Q9UN86 482 aaKnown RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 EP400Q96L91 3159 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 PPP1R37O75864 691 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 P4HA1P13674 534 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 LSP1P33241 339 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CLK2P49760 499 aaKnown RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 ACTN3Q08043 901 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CLMNQ96JQ2 1002 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 ERP44Q9BS26 406 aa12.67□□□□□ -0.38
PRDM16-207ENST00000512462 RANBP17Q9H2T7 1088 aaKnown RBP12.67□□□□□ -0.38
PRDM16-207ENST00000512462 CAND2O75155 1236 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 OATP04181 439 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 ATP5DP30049 168 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 P3H1Q32P28 736 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PCNX4Q63HM2 1172 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 ANO5Q75V66 913 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CCDC197Q8NCU1 140 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PYROXD1Q8WU10 500 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 LENG9Q96B70 501 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PRMT1Q99873 361 aaKnown RBP12.66□□□□□ -0.38
PRDM16-207ENST00000512462 DCTN4Q9UJW0 460 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PRPSAP2O60256 369 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PTPRAP18433 802 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 FLT3P36888 993 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 PDIA2Q13087 525 aaKnown RBP12.66□□□□□ -0.38
PRDM16-207ENST00000512462 RPAINQ86UA6 219 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 RILPQ96NA2 401 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 SLC38A10Q9HBR0 1119 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 IGLV3-22A0A075B6J6 115 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 LDHAP00338 332 aaKnown RBP12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CYP3A4P08684 503 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 RARBP10826 455 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 YY1P25490 414 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CHRNA3P32297 505 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CDH6P55285 790 aa12.66□□□□□ -0.38
PRDM16-207ENST00000512462 CDK17Q00537 523 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms