RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 EIF3DO15371 548 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX41-214ENST00000512334 TEX28O15482 410 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 GARTP22102 1010 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
DDX41-214ENST00000512334 RPL9P32969 192 aaKnown RBP17.29■□□□□ 0.36
DDX41-214ENST00000512334 BRCC3P46736 316 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 RTP2Q5QGT7 225 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 PRSS55Q6UWB4 352 aaPredicted RBP17.29■□□□□ 0.36
DDX41-214ENST00000512334 GLYCTKQ8IVS8 523 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 CD302Q8IX05 232 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 NELFCDQ8IXH7 590 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 SMRP1Q8NCR6 262 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 FAM213AQ9BRX8 229 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 PCIF1Q9H4Z3 704 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX41-214ENST00000512334 EXOC1Q9NV70 894 aa17.29■□□□□ 0.36
DDX41-214ENST00000512334 GOLGA8IPA6NC78 632 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 GOLGA8JA6NMD2 632 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 I3L4J1 428 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 ZNF202O95125 648 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
DDX41-214ENST00000512334 NFICP08651 508 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 RPL17P18621 184 aaKnown RBP17.28■□□□□ 0.36
DDX41-214ENST00000512334 CLCN4P51793 760 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 GUCY2FP51841 1108 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 CREMQ03060 361 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 EHHADHQ08426 723 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 PSMD5Q16401 504 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 JADE1Q6IE81 842 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
DDX41-214ENST00000512334 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
DDX41-214ENST00000512334 TMEM130Q8N3G9 435 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 BEST2Q8NFU1 509 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 SLC22A17Q8WUG5 538 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 TSPAN18Q96SJ8 248 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 CBWD1Q9BRT8 395 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 RXFP1Q9HBX9 757 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 VCANP13611 3396 aa17.28■□□□□ 0.36
DDX41-214ENST00000512334 UBE4BO95155 1302 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 KLRC4O43908 158 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 MYL1P05976 194 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 ADRB2P07550 413 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 HOXB8P17481 243 aaPredicted RBP17.27■□□□□ 0.36
DDX41-214ENST00000512334 CYP3A5P20815 502 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 MCM4P33991 863 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 SMAD2Q15796 467 aaKnown RBP17.27■□□□□ 0.36
DDX41-214ENST00000512334 KMT5BQ4FZB7 885 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 SYCE2Q6PIF2 218 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 CD300LGQ6UXG3 332 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 CRELD2Q6UXH1 353 aaPredicted RBP17.27■□□□□ 0.36
DDX41-214ENST00000512334 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 GPR65Q8IYL9 337 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 ZSWIM2Q8NEG5 633 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 SCFD1Q8WVM8 642 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 PIK3R5Q8WYR1 880 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 FBXL18Q96ME1 805 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 ASB7Q9H672 318 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 DZANK1Q9NVP4 752 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 FNIP2Q9P278 1114 aa17.27■□□□□ 0.36
DDX41-214ENST00000512334 USP15Q9Y4E8 981 aaPredicted RBP17.27■□□□□ 0.36
DDX41-214ENST00000512334 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.27■□□□□ 0.36
DDX41-214ENST00000512334 EXTL3O43909 919 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 IL18RAPO95256 599 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 GLUD1P00367 558 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 RPN1P04843 607 aaKnown RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 ZBTB6Q15916 424 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 RARS2Q5T160 578 aaKnown RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 CES5AQ6NT32 575 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 PDXDC1Q6P996 788 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 GPD1LQ8N335 351 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 C12orf76Q8N812 135 aaPredicted RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 LNX1Q8TBB1 728 aaPredicted RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 CCDC47Q96A33 483 aaKnown RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 RBAKQ9NYW8 714 aaPredicted RBP17.26■□□□□ 0.35
DDX41-214ENST00000512334 DERAQ9Y315 318 aa17.26■□□□□ 0.35
DDX41-214ENST00000512334 VWA8A3KMH1 1905 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 ANK1P16157 1881 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 KIAA0391O15091 583 aaKnown RBP17.25■□□□□ 0.35
DDX41-214ENST00000512334 FGFR3P22607 806 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 LRPAP1P30533 357 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 SSTR3P32745 418 aaPredicted RBP17.25■□□□□ 0.35
DDX41-214ENST00000512334 HOXD13P35453 343 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 POU5F1Q01860 360 aaKnown RBP17.25■□□□□ 0.35
DDX41-214ENST00000512334 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 ELMSAN1Q6PJG2 1045 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 BRSK2Q8IWQ3 736 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 S1PR5Q9H228 398 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 MAN1C1Q9NR34 630 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 CHMP5Q9NZZ3 219 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 DPP7Q9UHL4 492 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 C2CD2Q9Y426 696 aa17.25■□□□□ 0.35
DDX41-214ENST00000512334 PLXNA3P51805 1871 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms