RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZSWIM2Q8NEG5 633 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 DDX27Q96GQ7 796 aaKnown RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 RIPOR3Q96MK2 946 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 RPF1Q9H9Y2 349 aaKnown RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 KBTBD4Q9NVX7 518 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 SEL1LQ9UBV2 794 aa17.96■□□□□ 0.47
DDX41-213ENST00000512027 CPSF3Q9UKF6 684 aaKnown RBP17.96■□□□□ 0.47
DDX41-213ENST00000512027 DOCK6Q96HP0 2047 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 C2CD4DB7Z1M9 353 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 PPEF2O14830 753 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 DCXO43602 365 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 PRPF6O94906 941 aaKnown RBP17.95■□□□□ 0.46
DDX41-213ENST00000512027 SCP2P22307 547 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 ADSSP30520 456 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 MTHFRP42898 656 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 L1TD1Q5T7N2 865 aaKnown RBP17.95■□□□□ 0.46
DDX41-213ENST00000512027 RESP18Q5W5W9 173 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 ADALQ6DHV7 355 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 LILRA6Q6PI73 481 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 GPR149Q86SP6 731 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 GRAMD1CQ8IYS0 662 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 TRIM9Q9C026 710 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 OLFML3Q9NRN5 406 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 RCOR1Q9UKL0 485 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 AGO2Q9UKV8 859 aaKnown RBP17.95■□□□□ 0.46
DDX41-213ENST00000512027 CFAP45Q9UL16 551 aa17.95■□□□□ 0.46
DDX41-213ENST00000512027 CCDC195A0A1B0GUA6 201 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 NFICP08651 508 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 ASIC1P78348 528 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 ATAT1Q5SQI0 421 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 JADE1Q6IE81 842 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 GPR65Q8IYL9 337 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 IQUBQ8NA54 791 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 KREMEN2Q8NCW0 462 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 LEO1Q8WVC0 666 aaPredicted RBP17.94■□□□□ 0.46
DDX41-213ENST00000512027 HVCN1Q96D96 273 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 NECTIN4Q96NY8 510 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 ACCSQ96QU6 501 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 BLZF1Q9H2G9 400 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 PLEKHA5Q9HAU0 1116 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 MTRRQ9UBK8 725 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 NUB1Q9Y5A7 615 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 CDY1Q9Y6F8 540 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 STYXL1Q9Y6J8 313 aa17.94■□□□□ 0.46
DDX41-213ENST00000512027 TSC2P49815 1807 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 ABCD1P33897 745 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 MCM4P33991 863 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 OR1D2P34982 312 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 WNT7BP56706 349 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 CREMQ03060 361 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 ZBTB6Q15916 424 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
DDX41-213ENST00000512027 CCDC65Q8IXS2 484 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 POMGNT1Q8WZA1 660 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
DDX41-213ENST00000512027 SAAL1Q96ER3 474 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 LRFN3Q9BTN0 628 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 C1QTNF1Q9BXJ1 281 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 FAM13BQ9NYF5 915 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 FBXW11Q9UKB1 542 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 UBQLN1Q9UMX0 589 aaKnown RBP17.93■□□□□ 0.46
DDX41-213ENST00000512027 SCN1AP35498 2009 aa17.93■□□□□ 0.46
DDX41-213ENST00000512027 MYO10Q9HD67 2058 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 TULP1O00294 542 aaPredicted RBP17.92■□□□□ 0.46
DDX41-213ENST00000512027 TRAPPC3O43617 180 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 ADRB2P07550 413 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 ALADP13716 330 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 RPL9P32969 192 aaKnown RBP17.92■□□□□ 0.46
DDX41-213ENST00000512027 AFMP43652 599 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 KYAT1Q16773 422 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 VARS2Q5ST30 1063 aaKnown RBP17.92■□□□□ 0.46
DDX41-213ENST00000512027 SYCP3Q8IZU3 236 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 SMG7Q92540 1137 aaKnown RBP17.92■□□□□ 0.46
DDX41-213ENST00000512027 FAM84AQ96KN4 292 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 PCIF1Q9H4Z3 704 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 SERTAD1Q9UHV2 236 aa17.92■□□□□ 0.46
DDX41-213ENST00000512027 A0A1B0GVL5 298 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 GOLGA8IPA6NC78 632 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 GOLGA8JA6NMD2 632 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 LRPAP1P30533 357 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 ARPP19P56211 112 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 KRT85P78386 507 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 CUL4BQ13620 913 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 TMEM31Q5JXX7 168 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 SLFN12LQ6IEE8 588 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 C15orf39Q6ZRI6 1047 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 CMASQ8NFW8 434 aaPredicted RBP17.91■□□□□ 0.46
DDX41-213ENST00000512027 NOC3LQ8WTT2 800 aaKnown RBP17.91■□□□□ 0.46
DDX41-213ENST00000512027 SUSD3Q96L08 255 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 CBWD1Q9BRT8 395 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 FAM213AQ9BRX8 229 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 PLEKHA4Q9H4M7 779 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 GDPD2Q9HCC8 539 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 KCNH3Q9ULD8 1083 aa17.91■□□□□ 0.46
DDX41-213ENST00000512027 EXOC7Q9UPT5 735 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms