RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ODF2Q5BJF6 829 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 IKBIPQ70UQ0 350 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 SAMD7Q7Z3H4 446 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 C16orf71Q8IYS4 520 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 GPC2Q8N158 579 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 AGR3Q8TD06 166 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ANKRD7Q92527 254 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PLD4Q96BZ4 506 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ACO2Q99798 780 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 NOC4LQ9BVI4 516 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 ARHGAP39Q9C0H5 1083 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 COA1Q9GZY4 146 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 WNT5BQ9H1J7 359 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 PNMA3Q9UL41 463 aa5.41□□□□□ -1.54
TRAPPC11-208ENST00000511955 K7EPI3 171 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 KPNA5O15131 536 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 TLR3O15455 904 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 NCK2O43639 380 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 URI1O94763 535 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 FGFR2P21802 821 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 IGFBP4P22692 258 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 GDI1P31150 447 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 SOX6P35712 828 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 MAP2K2P36507 400 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 ACY1Q03154 408 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 ICA1Q05084 483 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 BTKQ06187 659 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 PWP1Q13610 501 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 SCARF1Q14162 830 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 SART3Q15020 963 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 GRIK5Q16478 980 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 BBS9Q3SYG4 887 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 MFSD14BQ5SR56 506 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 CORO6Q6QEF8 472 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 PTRH1Q86Y79 214 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 UNC45BQ8IWX7 931 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 FAM178BQ8IXR5 827 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 EFCAB13Q8IY85 973 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 ANKRD53Q8N9V6 530 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 BTN2A2Q8WVV5 523 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 THOC1Q96FV9 657 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 TUBA1CQ9BQE3 449 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 CCDC106Q9BWC9 280 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 CLSTN2Q9H4D0 955 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 DBNLQ9UJU6 430 aaKnown RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 MAGED2Q9UNF1 606 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 CAB39Q9Y376 341 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 CHD4Q14839 1912 aa5.4□□□□□ -1.54
TRAPPC11-208ENST00000511955 LTBP1Q14766 1721 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 ARHGAP10A1A4S6 786 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 RGSL1A5PLK6 1076 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 DDX39AO00148 427 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CETN3O15182 167 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CPNE3O75131 537 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 FBXO24O75426 580 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC22A3O75751 556 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 DNAJC8O75937 253 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 FSBPO95073 299 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 YEATS4O95619 227 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 S100A6P06703 90 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 RPSAP08865 295 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 VEGFAP15692 232 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 TNFSF4P23510 183 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 MTIF2P46199 727 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CPT1AP50416 773 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 RWDD2BP57060 319 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 USP46P62068 366 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 FUT2Q10981 343 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 EFR3AQ14156 821 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 PLCL1Q15111 1095 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 SUPT20HL1Q3ZLR7 823 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 FNDC3BQ53EP0 1204 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 FAM209AQ5JX71 171 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 YOD1Q5VVQ6 348 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 IL27RAQ6UWB1 636 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 DLK2Q6UY11 383 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CMTR2Q8IYT2 770 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CERS5Q8N5B7 392 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMCO5AQ8N6Q1 288 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CTCFLQ8NI51 663 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 NANOS1Q8WY41 292 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 GIMAP5Q96F15 307 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 PPP1R13BQ96KQ4 1090 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 GAS2L1Q99501 681 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 B3GNT4Q9C0J1 378 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 IFT22Q9H7X7 185 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CD93Q9NPY3 652 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 WASH6PQ9NQA3 447 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 ORC3Q9UBD5 711 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 CNOT7Q9UIV1 285 aaKnown RBP5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 LIMCH1Q9UPQ0 1083 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHAC2Q9Y5I4 1007 aa5.4□□□□□ -1.55
TRAPPC11-208ENST00000511955 ASTN2O75129 1339 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A087X0M5 115 aa5.39□□□□□ -1.55
TRAPPC11-208ENST00000511955 A0A1B0GX30 115 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms