RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 TNFSF9P41273 254 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
CXCL3-204ENST00000511669 VSNL1P62760 191 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 TFAMQ00059 246 aaKnown RBP17.65■□□□□ 0.42
CXCL3-204ENST00000511669 USP38Q8NB14 1042 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 OR5B17Q8NGF7 314 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 APBA2Q99767 749 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.65■□□□□ 0.42
CXCL3-204ENST00000511669 FDXACB1Q9BRP7 624 aaPredicted RBP17.65■□□□□ 0.42
CXCL3-204ENST00000511669 KATNAL1Q9BW62 490 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 NIF3L1Q9GZT8 377 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 CARD9Q9H257 536 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 ASB7Q9H672 318 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 IFT122Q9HBG6 1241 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 OSGEPQ9NPF4 335 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 ZNF446Q9NWS9 450 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 PACSIN2Q9UNF0 486 aaPredicted RBP17.65■□□□□ 0.42
CXCL3-204ENST00000511669 CNTN6Q9UQ52 1028 aa17.65■□□□□ 0.42
CXCL3-204ENST00000511669 PTPRJQ12913 1337 aa17.64■□□□□ 0.42
CXCL3-204ENST00000511669 A6NJR5 290 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 DYNC1LI2O43237 492 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 SLC10A3P09131 477 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 P4HA1P13674 534 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 GNA15P30679 374 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 DCAF4L1Q3SXM0 396 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 PALB2Q86YC2 1186 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 IFNL1Q8IU54 200 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 CD302Q8IX05 232 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 RBBP8NLQ8NC74 664 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 ZNF564Q8TBZ8 553 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 ARHGEF26Q96DR7 871 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 PCDHB18PQ96TA0 734 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 GCOM2Q9BZD3 368 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 MTMR12Q9C0I1 747 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 WNT8AQ9H1J5 351 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 AVENQ9NQS1 362 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 LCMT1Q9UIC8 334 aa17.64■□□□□ 0.41
CXCL3-204ENST00000511669 TTC7AQ9ULT0 858 aaPredicted RBP17.64■□□□□ 0.41
CXCL3-204ENST00000511669 GOLGA6L10A0A0M3HER8 536 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
CXCL3-204ENST00000511669 GJB1P08034 283 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 HSPA6P17066 643 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 WNT7BP56706 349 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 ZNF699Q32M78 642 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 SEZ6Q53EL9 994 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 TMEM270Q6UE05 265 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 TLK2Q86UE8 772 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 RASGEF1CQ8N431 466 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 VCPIP1Q96JH7 1222 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
CXCL3-204ENST00000511669 STIM2Q9P246 746 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 CEP83Q9Y592 693 aa17.63■□□□□ 0.41
CXCL3-204ENST00000511669 TTLL13PA6NNM8 815 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 VTNP04004 478 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 ATICP31939 592 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 BEND6Q5SZJ8 279 aaPredicted RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 SPOPLQ6IQ16 392 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 C17orf99Q6UX52 265 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 DNAAF5Q86Y56 855 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 IFT20Q8IY31 132 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 MS4A14Q96JA4 679 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 ARID3AQ99856 593 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 NUP85Q9BW27 656 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 FAM124BQ9H5Z6 455 aaPredicted RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 APOBEC3GQ9HC16 384 aaKnown RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 MRPL47Q9HD33 250 aaKnown RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 RBM12Q9NTZ6 932 aaKnown RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 CNOT8Q9UFF9 292 aaKnown RBP17.62■□□□□ 0.41
CXCL3-204ENST00000511669 SCINQ9Y6U3 715 aa17.62■□□□□ 0.41
CXCL3-204ENST00000511669 TNPO2O14787 897 aaKnown RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 B4GALT5O43286 388 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 THAP12O43422 761 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 SEC31AO94979 1220 aaKnown RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 F2P00734 622 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 GNAT1P11488 350 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 ACO1P21399 889 aaKnown RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 TNFRSF8P28908 595 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 CENPCQ03188 943 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 EEF1DP3Q658K8 133 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 PDZD7Q9H5P4 517 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 MINDY3Q9H8M7 445 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 GNEQ9Y223 722 aaKnown RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 NUB1Q9Y5A7 615 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 SMIM35A0A1B0GVV1 85 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 CCDC66A2RUB6 948 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 SPOPO43791 374 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 KPNA6O60684 536 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 LSM8O95777 96 aaKnown RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 UNGP13051 313 aaPredicted RBP17.61■□□□□ 0.41
CXCL3-204ENST00000511669 MYL6P60660 151 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 ZNF667Q5HYK9 610 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 SEL1L2Q5TEA6 688 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 CCDC26Q8TAB7 109 aa17.61■□□□□ 0.41
CXCL3-204ENST00000511669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms