RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MRFAP1Q9Y605 127 aa4.17□□□□□ -1.74
CHD1-207ENST00000511628 CENPVL1A0A0U1RR11 272 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 E2F8A0AVK6 867 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 OVOL3O00110 214 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 GPR32O75388 356 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 RFPL1O75677 317 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 NUDT3O95989 172 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 FOSP01100 380 aaPredicted RBP4.16□□□□□ -1.74
CHD1-207ENST00000511628 ALOX15P16050 662 aaPredicted RBP4.16□□□□□ -1.74
CHD1-207ENST00000511628 AGXTP21549 392 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 C5AR1P21730 350 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 BMP5P22003 454 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 CCND1P24385 295 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 SREBF1P36956 1147 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 RECQLP46063 649 aaPredicted RBP4.16□□□□□ -1.74
CHD1-207ENST00000511628 PTTG1IPP53801 180 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 TBX4P57082 545 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 TAP1Q03518 808 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 MLC1Q15049 377 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 ERCC6LQ2NKX8 1250 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 FAM102BQ5T8I3 360 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 CCDC181Q5TID7 509 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 HECTD2Q5U5R9 776 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 MIGA2Q7L4E1 593 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 SYT12Q8IV01 421 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 TCEAL8Q8IYN2 117 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 MAGEB6Q8N7X4 407 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 TTC8Q8TAM2 541 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 CAMKK2Q96RR4 588 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 RNPEPQ9H4A4 650 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 TCF7L1Q9HCS4 588 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 ANLNQ9NQW6 1124 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 ZNF277Q9NRM2 450 aaPredicted RBP4.16□□□□□ -1.74
CHD1-207ENST00000511628 TUBD1Q9UJT1 453 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 PACSIN3Q9UKS6 424 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 CHST2Q9Y4C5 530 aa4.16□□□□□ -1.74
CHD1-207ENST00000511628 KIAA0391O15091 583 aaKnown RBP4.15□□□□□ -1.75
CHD1-207ENST00000511628 CDKL5O76039 1030 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 HKR1P10072 659 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 ATF3P18847 181 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 BMPR1AP36894 532 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 ALDH1A3P47895 512 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 FXR1P51114 621 aaKnown RBP eCLIP4.15□□□□□ -1.75
CHD1-207ENST00000511628 MGAT2Q10469 447 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 UBXN2BQ14CS0 331 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 BEAN1Q3B7T3 259 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 FAM102AQ5T9C2 384 aaPredicted RBP4.15□□□□□ -1.75
CHD1-207ENST00000511628 NXNQ6DKJ4 435 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 ARMC6Q6NXE6 501 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 RHOUQ7L0Q8 258 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 UBE3BQ7Z3V4 1068 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 MAPKAPK5Q8IW41 473 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 ARHGEF19Q8IW93 802 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 RHOT2Q8IXI1 618 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 TEX101Q9BY14 249 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 RIOX1Q9H6W3 641 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 SERPINB13Q9UIV8 391 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 ACTL7AQ9Y615 435 aa4.15□□□□□ -1.75
CHD1-207ENST00000511628 KLHL33A6NCF5 533 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 TMEM200CA6NKL6 621 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 GPANK1O95872 356 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 ITGAMP11215 1152 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 DDCP20711 480 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 ZEB1P37275 1124 aaPredicted RBP4.14□□□□□ -1.75
CHD1-207ENST00000511628 BLOC1S1P78537 153 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 PPP3CAQ08209 521 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 STRIP1Q5VSL9 837 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 AGAP9Q5VTM2 703 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 EFCAB2Q5VUJ9 269 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 EPM2AIP1Q7L775 607 aaPredicted RBP4.14□□□□□ -1.75
CHD1-207ENST00000511628 BEND2Q8NDZ0 799 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.14□□□□□ -1.75
CHD1-207ENST00000511628 NRG4Q8WWG1 115 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 CASKIN2Q8WXE0 1202 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 SSH1Q8WYL5 1049 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 DPF2Q92785 391 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 HSPBAP1Q96EW2 488 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 AGAP2Q99490 1192 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 ZSWIM1Q9BR11 485 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 ALOXE3Q9BYJ1 711 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 TDP1Q9NUW8 608 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 SCOCQ9UIL1 159 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 ANKRD6Q9Y2G4 727 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 HS3ST4Q9Y661 456 aa4.14□□□□□ -1.75
CHD1-207ENST00000511628 MYBBP1AQ9BQG0 1328 aaKnown RBP4.14□□□□□ -1.75
CHD1-207ENST00000511628 A0A1B0GTW7 788 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 TCRBV7S2A1N4TA0A589 114 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 NDUFS2O75306 463 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 IL33O95760 270 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 MAP4K4O95819 1239 aaPredicted RBP4.13□□□□□ -1.75
CHD1-207ENST00000511628 RPLP2P05387 115 aaKnown RBP4.13□□□□□ -1.75
CHD1-207ENST00000511628 CT47B1P0C2W7 299 aaPredicted RBP4.13□□□□□ -1.75
CHD1-207ENST00000511628 KRT4P19013 534 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 FPR1P21462 350 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 LPOP22079 712 aaPredicted RBP4.13□□□□□ -1.75
CHD1-207ENST00000511628 GNALP38405 381 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 HSD11B2P80365 405 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 TP53BP2Q13625 1128 aa4.13□□□□□ -1.75
CHD1-207ENST00000511628 CSRP2Q16527 193 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms