RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 FUT10Q6P4F1 479 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 USP37Q86T82 979 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 WDR49Q8IV35 697 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 EFCAB13Q8IY85 973 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 TCF25Q9BQ70 676 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 PAAF1Q9BRP4 392 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 HERC2P3Q9BVR0 1158 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 ZBP1Q9H171 429 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 NGRNQ9NPE2 291 aaKnown RBP13.93□□□□□ -0.18
COL6A6-203ENST00000511332 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 STXBP5LQ9Y2K9 1186 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 FSD2A1L4K1 749 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
COL6A6-203ENST00000511332 TRAPPC3O43617 180 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 TADA2AO75478 443 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 B3GAT3O94766 335 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 CSPG5O95196 566 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 SOD2P04179 222 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 URODP06132 367 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 TMEM191BP0C7N4 346 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 BMP6P22004 513 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 CCNE1P24864 410 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 DNAJB1P25685 340 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 TFAMQ00059 246 aaKnown RBP13.92□□□□□ -0.18
COL6A6-203ENST00000511332 PAK1Q13153 545 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
COL6A6-203ENST00000511332 CEP135Q66GS9 1140 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 FOXR2Q6PJQ5 311 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 HASPINQ8TF76 798 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 ANKRD36BP1Q96IX9 119 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 ZNF560Q96MR9 790 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 CGRRF1Q99675 332 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 MKNK1Q9BUB5 465 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 NSUN3Q9H649 340 aaKnown RBP13.92□□□□□ -0.18
COL6A6-203ENST00000511332 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 DACH1Q9UI36 760 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 CTNND2Q9UQB3 1225 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
COL6A6-203ENST00000511332 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 F8W810 466 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 FSCN2O14926 492 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 CETN3O15182 167 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 SLC16A3O15427 465 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 TNNC2P02585 160 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 CTSAP10619 480 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 PAX3P23760 479 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 GLUD2P49448 558 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 WNT7BP56706 349 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 CREMQ03060 361 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 ADAM9Q13443 819 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 CAMK1Q14012 370 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 PLPP4Q5VZY2 271 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 KLHL10Q6JEL2 608 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 RBM43Q6ZSC3 357 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MLKLQ8NB16 471 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 NELFBQ8WX92 580 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
COL6A6-203ENST00000511332 MTCL1Q9Y4B5 1905 aaKnown RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 PPP1R3GB7ZBB8 358 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 EFEMP2O95967 443 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 KRT13P13646 458 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 TNNI1P19237 187 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 CA8P35219 290 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 PNPLA4P41247 253 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 CASP4P49662 377 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 ENPEPQ07075 957 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 KLHL40Q2TBA0 621 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 USP41Q3LFD5 358 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 C9orf57Q5W0N0 161 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 KIAA1841Q6NSI8 718 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
COL6A6-203ENST00000511332 GPR65Q8IYL9 337 aa13.9□□□□□ -0.18
COL6A6-203ENST00000511332 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms