RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PGBD2Q6P3X8 592 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 LDHAL6AQ6ZMR3 332 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 PRR23BQ6ZRT6 265 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 FRMD5Q7Z6J6 570 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 MICU3Q86XE3 530 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF354CQ86Y25 554 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 KLHL36Q8N4N3 616 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 OR6B3Q8NGW1 331 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 CYP2W1Q8TAV3 490 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 EIF2AQ9BY44 585 aaKnown RBP6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 KCNH6Q9H252 994 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 PCDHGB2Q9Y5G2 931 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 SH3D21A4FU49 640 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 GOLGA6L3A6NEY3 463 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 PRSS29PA6NIE9 313 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 LRRC10BA6NIK2 292 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 MTHFD1P11586 935 aaKnown RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CD53P19397 219 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 FGFR2P21802 821 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 ALDH1A3P47895 512 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 HABP2Q14520 560 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 PUM3Q15397 648 aaKnown RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 ARL13BQ3SXY8 428 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 VWA3BQ502W6 1294 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 ALFQ53S48 1182 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZMAT1Q5H9K5 638 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CIAPIN1Q6FI81 312 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 TMEM132EQ6IEE7 984 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCDC174Q6PII3 467 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 USP30Q70CQ3 517 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 PDSS2Q86YH6 399 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 LIX1LQ8IVB5 337 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 SYTL1Q8IYJ3 562 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCDC33Q8N5R6 958 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 FANCBQ8NB91 859 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCT6BQ92526 530 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 SIGLEC10Q96LC7 697 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 DIRC2Q96SL1 478 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 CDC5LQ99459 802 aaKnown RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 P2RX7Q99572 595 aaKnown RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 GDF15Q99988 308 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 C1orf43Q9BWL3 253 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF518BQ9C0D4 1074 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 KIAA1683Q9H0B3 1180 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 MYLK2Q9H1R3 596 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 MSL2Q9HCI7 577 aa6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 RBM8AQ9Y5S9 174 aaKnown RBP6.57□□□□□ -1.36
HMGB1P47-201ENST00000511281 FFAR2O15552 330 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 PJA2O43164 708 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 SLC43A1O75387 559 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 WDHD1O75717 1129 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 AHSGP02765 367 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 CSTBP04080 98 aaKnown RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 ANXA2P07355 339 aaKnown RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 HARSP12081 509 aaKnown RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 HDCP19113 662 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 EEF1GP26641 437 aaKnown RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 PTPN7P35236 360 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 DLG4P78352 724 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 FOXO1Q12778 655 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCDC93Q567U6 631 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 FAM26FQ5R3K3 315 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF783Q6ZMS7 281 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 CATSPERGQ6ZRH7 1159 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 BEND5Q7L4P6 421 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZDHHC14Q8IZN3 488 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 CMTM4Q8IZR5 234 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 FBXO15Q8NCQ5 510 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 MDM1Q8TC05 714 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 SGPP1Q9BX95 441 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 SLC23A1Q9UHI7 598 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 LZTS1Q9Y250 596 aa6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P47-201ENST00000511281 HMGB1P1B2RPK0 211 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 BTN3A1O00481 513 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 AREL1O15033 823 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 GRM6O15303 877 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 ANXA1P04083 346 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF888P0CJ79 500 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 PDIA3P30101 505 aaKnown RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 GZMKP49863 264 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 MAPK10P53779 464 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 BPIFB4P59827 614 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 RPS16P62249 146 aaKnown RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 PTH1RQ03431 593 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 EXOSC9Q06265 439 aaKnown RBP6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 FSTL1Q12841 308 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 BIRC3Q13489 604 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 STARD3Q14849 445 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 C3orf38Q5JPI3 329 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 MFSD14BQ5SR56 506 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 AFMIDQ63HM1 303 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 CACNA2D3Q8IZS8 1091 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 ZNF384Q8TF68 577 aa6.55□□□□□ -1.36
HMGB1P47-201ENST00000511281 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms