RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 EPM2AIP1Q7L775 607 aaPredicted RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 C12orf76Q8N812 135 aaPredicted RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 DDX27Q96GQ7 796 aaKnown RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 TMEM206Q9H813 350 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 CHST7Q9NS84 486 aa15.2■□□□□ 0.02
DDX41-212ENST00000511040 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
DDX41-212ENST00000511040 CUL9Q8IWT3 2517 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 PVALEFA0A1B0GWK0 134 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 MBTPS2O43462 519 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 ZNF202O95125 648 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 EHHADHQ08426 723 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 SMAD4Q13485 552 aaKnown RBP15.19■□□□□ 0.02
DDX41-212ENST00000511040 PUS10Q3MIT2 529 aaKnown RBP15.19■□□□□ 0.02
DDX41-212ENST00000511040 KMT5BQ4FZB7 885 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 SYCE2Q6PIF2 218 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 TMEM184AQ6ZMB5 413 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 KRBA2Q6ZNG9 492 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 SCFD1Q8WVM8 642 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 CASP10Q92851 521 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 TTPALQ9BTX7 342 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 EXOC1Q9NV70 894 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 CDH22Q9UJ99 828 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 CIZ1Q9ULV3 898 aaPredicted RBP15.19■□□□□ 0.02
DDX41-212ENST00000511040 SSX2IPQ9Y2D8 614 aa15.19■□□□□ 0.02
DDX41-212ENST00000511040 TMEM189-UBE2V1I3L0A0 370 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 EIF3DO15371 548 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX41-212ENST00000511040 ADRB2P07550 413 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
DDX41-212ENST00000511040 RPL9P32969 192 aaKnown RBP15.18■□□□□ 0.02
DDX41-212ENST00000511040 CLCN4P51793 760 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 WNT7BP56706 349 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
DDX41-212ENST00000511040 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 ZBTB6Q15916 424 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 ARMCX5Q6P1M9 558 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 PALB2Q86YC2 1186 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 SMRP1Q8NCR6 262 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 FEZF2Q8TBJ5 459 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 ZNF507Q8TCN5 953 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 RXFP1Q9HBX9 757 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
DDX41-212ENST00000511040 USP15Q9Y4E8 981 aaPredicted RBP15.18■□□□□ 0.02
DDX41-212ENST00000511040 NUB1Q9Y5A7 615 aa15.18■□□□□ 0.02
DDX41-212ENST00000511040 VWA8A3KMH1 1905 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 ANK1P16157 1881 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 PPEF2O14830 753 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 EXTL3O43909 919 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 RPN1P04843 607 aaKnown RBP15.17■□□□□ 0.02
DDX41-212ENST00000511040 ADH1AP07327 375 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 WEE2P0C1S8 567 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 GARTP22102 1010 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 FGFR3P22607 806 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 MCM4P33991 863 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 STK4Q13043 487 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 PSMD5Q16401 504 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
DDX41-212ENST00000511040 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
DDX41-212ENST00000511040 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 LNX1Q8TBB1 728 aaPredicted RBP15.17■□□□□ 0.02
DDX41-212ENST00000511040 FAM84AQ96KN4 292 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 FBXL18Q96ME1 805 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 S1PR5Q9H228 398 aa15.17■□□□□ 0.02
DDX41-212ENST00000511040 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 CLIC2O15247 247 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 ADAM12O43184 909 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 TRAPPC3O43617 180 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 LRPAP1P30533 357 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 DPYDQ12882 1025 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 CD302Q8IX05 232 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 EFCAB13Q8IY85 973 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 FMR1NBQ8N0W7 255 aaPredicted RBP15.16■□□□□ 0.02
DDX41-212ENST00000511040 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 PIK3R5Q8WYR1 880 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX41-212ENST00000511040 AGPAT3Q9NRZ7 376 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 RBAKQ9NYW8 714 aaPredicted RBP15.16■□□□□ 0.02
DDX41-212ENST00000511040 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 CHMP5Q9NZZ3 219 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 FAM50BQ9Y247 325 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 UBE4BO95155 1302 aa15.16■□□□□ 0.02
DDX41-212ENST00000511040 XPOTO43592 962 aaKnown RBP15.15■□□□□ 0.02
DDX41-212ENST00000511040 GADD45BO75293 160 aaPredicted RBP15.15■□□□□ 0.02
DDX41-212ENST00000511040 IL18RAPO95256 599 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 GLUD1P00367 558 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
DDX41-212ENST00000511040 CYP3A5P20815 502 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 CYP2J2P51589 502 aa15.15■□□□□ 0.02
DDX41-212ENST00000511040 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
DDX41-212ENST00000511040 SMAD2Q15796 467 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms