RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 SATB1Q01826 763 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CETN1Q12798 172 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 TCEAL1Q15170 157 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CLSTN1O94985 981 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CXCL8P10145 99 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 ABCB4P21439 1286 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 TLK2Q86UE8 772 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 HYOU1Q9Y4L1 999 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 MBLAC1A4D2B0 266 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 INO80B-WBP1J3KQ70 363 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 KIF3CO14782 793 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 SASH3O75995 380 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CLTAP09496 248 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 SMIM10L2AP0DMW4 78 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 SMIM10L2BP0DMW5 78 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 UNGP13051 313 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 HOXC8P31273 242 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 OSTNP61366 133 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 ZNF200P98182 395 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 CDR2Q01850 454 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 DGKDQ16760 1214 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 KCTD19Q17RG1 926 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 ZBTB8OSQ8IWT0 167 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-205ENST00000509860 ST7Q9NRC1 585 aa13.4□□□□□ -0.26
PRDM16-205ENST00000509860 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 DYNC1LI2O43237 492 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CYP2B6P20813 491 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 TM4SF4P48230 202 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 DNA2P51530 1060 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 BEX3Q00994 111 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CUL2Q13617 745 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 ICE2Q659A1 982 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 LLGL2Q6P1M3 1020 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 HES6Q96HZ4 224 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 ASS1P00966 412 aaKnown RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 FTLP02792 175 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 NFICP08651 508 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 MATR3P43243 847 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 ASPAP45381 313 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 MYL6P60660 151 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 VSNL1P62760 191 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 ZNF568Q3ZCX4 644 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 TMEM40Q8WWA1 233 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 SGSM3Q96HU1 749 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 RASSF4Q9H2L5 321 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CTAGE15A4D2H0 777 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CTAGE8P0CG41 777 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 TNFAIP3P21580 790 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 NCOA4Q13772 614 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CTAGE6Q86UF2 777 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 CTAGE4Q8IX94 777 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 THNSL1Q8IYQ7 743 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
PRDM16-205ENST00000509860 JPH2Q9BR39 696 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-205ENST00000509860 ASAP2O43150 1006 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 USP8P40818 1118 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 NOP2P46087 812 aaKnown RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 HADHBP55084 474 aaKnown RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TMEM62Q0P6H9 643 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TMEM59LQ9UK28 342 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 FRMPD3Q5JV73 1810 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 SCN1AP35498 2009 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 ANKRD62A6NC57 917 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 MAGEB2O15479 319 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 B4GALT4O60513 344 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 KIF4AO95239 1232 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TRIM32Q13049 653 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 IRF5Q13568 498 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TFDP1Q14186 410 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TRIM66O15016 1216 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 MYBL2P10244 700 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 CLEC16AQ2KHT3 1053 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 CC2D1AQ6P1N0 951 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-205ENST00000509860 SPATA4Q8NEY3 305 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 VTI1AQ96AJ9 217 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 APBA2Q99767 749 aa13.38□□□□□ -0.27
PRDM16-205ENST00000509860 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
PRDM16-205ENST00000509860 CYP1A1P04798 512 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-205ENST00000509860 SLC10A6Q3KNW5 377 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms