RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MUTP22033 750 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 EFNA5P52803 228 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 FOXK2Q01167 660 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 PTGDRQ13258 359 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 UBXN2BQ14CS0 331 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 PPP2R5AQ15172 486 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 RINT1Q6NUQ1 792 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 TSSK4Q6SA08 328 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 ERMP1Q7Z2K6 904 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 ZNF461Q8TAF7 563 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 ERMNQ8TAM6 284 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 NELL1Q92832 810 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 CLDN23Q96B33 292 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 TMEM134Q9H6X4 195 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 AVENQ9NQS1 362 aaPredicted RBP17.47■□□□□ 0.39
RAB40C-202ENST00000509637 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
RAB40C-202ENST00000509637 MRPS23Q9Y3D9 190 aaKnown RBP17.47■□□□□ 0.39
RAB40C-202ENST00000509637 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 PODXLO00592 558 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 SLC16A4O15374 487 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 KCNE1P15382 129 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 ARPP19P56211 112 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 PRKCQQ04759 706 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 SLC10A6Q3KNW5 377 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 FAM78AQ5JUQ0 283 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 PDXDC1Q6P996 788 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 ANKS3Q6ZW76 656 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 MTSS1LQ765P7 747 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 LRRC15Q8TF66 581 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 PNMA5Q96PV4 448 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 CEP72Q9P209 647 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
RAB40C-202ENST00000509637 CITO14578 2027 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 ECI2O75521 394 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 GJA1P17302 382 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 U2AF2P26368 475 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAB40C-202ENST00000509637 HOXC13P31276 330 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 ORC2Q13416 577 aaPredicted RBP17.45■□□□□ 0.38
RAB40C-202ENST00000509637 GRM2Q14416 872 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 PDIA5Q14554 519 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
RAB40C-202ENST00000509637 ZNF568Q3ZCX4 644 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 TPRG1Q6ZUI0 275 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 RSPRY1Q96DX4 576 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 SHDQ96IW2 340 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 UROC1Q96N76 676 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 CORO1BQ9BR76 489 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 OSBPL6Q9BZF3 934 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 SPATA6Q9NWH7 488 aaPredicted RBP17.45■□□□□ 0.38
RAB40C-202ENST00000509637 CNTN3Q9P232 1028 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 FRYLO94915 3013 aa17.45■□□□□ 0.38
RAB40C-202ENST00000509637 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
RAB40C-202ENST00000509637 TDGF1P13385 188 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 ATF2P15336 505 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 PTPN2P17706 415 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 TGM1P22735 817 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 CSTF1Q05048 431 aaKnown RBP17.44■□□□□ 0.38
RAB40C-202ENST00000509637 SPAG1Q07617 926 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 TCEAL8Q8IYN2 117 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 ZBTB44Q8NCP5 570 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
RAB40C-202ENST00000509637 TUBGCP4Q9UGJ1 667 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 PHLPP2Q6ZVD8 1323 aa17.44■□□□□ 0.38
RAB40C-202ENST00000509637 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 LILRB5O75023 590 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 HARSP12081 509 aaKnown RBP17.43■□□□□ 0.38
RAB40C-202ENST00000509637 VIPR2P41587 438 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 TRAPPC10P48553 1259 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 VITQ6UXI7 678 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 RNF19BQ6ZMZ0 732 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 RTL10Q7L3V2 364 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 RUBCNQ92622 972 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 SUSD3Q96L08 255 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 ACAP3Q96P50 834 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
RAB40C-202ENST00000509637 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
RAB40C-202ENST00000509637 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 MRPL4Q9BYD3 311 aaKnown RBP17.43■□□□□ 0.38
RAB40C-202ENST00000509637 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 KMT5AQ9NQR1 393 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.43■□□□□ 0.38
RAB40C-202ENST00000509637 DLL3Q9NYJ7 618 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 GDE1Q9NZC3 331 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 INSL5Q9Y5Q6 135 aa17.43■□□□□ 0.38
RAB40C-202ENST00000509637 OR4Q2P0C623 313 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 MCF2P10911 925 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 GUCY2FP51841 1108 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 MTAPQ13126 283 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 GAS6Q14393 721 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 ZBTB6Q15916 424 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 ZNF528Q3MIS6 628 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms