RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 MTSS1LQ765P7 747 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 RTL10Q7L3V2 364 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 DTWD2Q8NBA8 298 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 FGF13Q92913 245 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 AK8Q96MA6 479 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 RPP25Q9BUL9 199 aaKnown RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 TBC1D17Q9HA65 648 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 HCFC1R1Q9NWW0 138 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 DNMT3BQ9UBC3 853 aaKnown RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 KMT2EQ8IZD2 1858 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 DENND4AQ7Z401 1863 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 ABLIM1O14639 778 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 PRRG1O14668 218 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 SYN3O14994 580 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 LRG1P02750 347 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 KRT18P05783 430 aaKnown RBP16.8■□□□□ 0.28
TPM3-219ENST00000509409 MCM4P33991 863 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 SLC10A6Q3KNW5 377 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 SPECC1Q5M775 1068 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 ZPBP2Q6X784 338 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 GPBP1Q86WP2 473 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 CCDC105Q8IYK2 499 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 MYCT1Q8N699 235 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 ZNF461Q8TAF7 563 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 FGF14Q92915 247 aa16.8■□□□□ 0.28
TPM3-219ENST00000509409 MRPS23Q9Y3D9 190 aaKnown RBP16.8■□□□□ 0.28
TPM3-219ENST00000509409 FAM13AO94988 1023 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 POU2F2P09086 479 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 PTPN2P17706 415 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 LIG4P49917 911 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 GPC5P78333 572 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ROR1Q01973 937 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 MCL1Q07820 350 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ANGPT1Q15389 498 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 CTXN3Q4LDR2 81 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ARSHQ5FYA8 562 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 FRMD5Q7Z6J6 570 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 APPL2Q8NEU8 664 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ING5Q8WYH8 240 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 MCRS1Q96EZ8 462 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ZHX3Q9H4I2 956 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 ARHGEF3Q9NR81 526 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 SLC2A4RGQ9NR83 387 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 SIT1Q9Y3P8 196 aa16.79■□□□□ 0.28
TPM3-219ENST00000509409 PROB1E7EW31 1015 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 SLC26A4O43511 780 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 BMP15O95972 392 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 DCNP07585 359 aaKnown RBP16.78■□□□□ 0.28
TPM3-219ENST00000509409 RHOP08100 348 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 CLTAP09496 248 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 CXCL8P10145 99 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 NBL1P41271 181 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 SPAG1Q07617 926 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 SLC8B1Q6J4K2 584 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 SHDQ96IW2 340 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 SUSD3Q96L08 255 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 FBXL5Q9UKA1 691 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 MTCL1Q9Y4B5 1905 aaKnown RBP16.78■□□□□ 0.28
TPM3-219ENST00000509409 CACNA1HO95180 2353 aa16.78■□□□□ 0.28
TPM3-219ENST00000509409 WDR27A2RRH5 827 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 K7ENM7 598 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 MEFVO15553 781 aaPredicted RBP16.77■□□□□ 0.28
TPM3-219ENST00000509409 ABLIM3O94929 683 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 ATF2P15336 505 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 LONP1P36776 959 aaKnown RBP16.77■□□□□ 0.28
TPM3-219ENST00000509409 NCKAP1LP55160 1127 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
TPM3-219ENST00000509409 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.28
TPM3-219ENST00000509409 MCM6Q14566 821 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 ZNF280DQ6N043 979 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 PHLDB3Q6NSJ2 640 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 ASCL5Q7RTU5 278 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 BRAPQ7Z569 592 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 ELMOD1Q8N336 334 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 DDX12PQ92771 950 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 FAM212AQ96EL1 285 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 KXD1Q9BQD3 176 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 CORO1BQ9BR76 489 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 TUBGCP4Q9UGJ1 667 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
TPM3-219ENST00000509409 ZFHX2Q9C0A1 2572 aaPredicted RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 ARHGEF37A1IGU5 675 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 LACTBL1A8MY62 500 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 TBC1D4O60343 1298 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 PPP2R3AQ06190 1150 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 KARSQ15046 597 aaKnown RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
TPM3-219ENST00000509409 KYAT1Q16773 422 aa16.76■□□□□ 0.27
TPM3-219ENST00000509409 SLC44A4Q53GD3 710 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms