RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 WNT16Q9UBV4 365 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 TNFSF13BQ9Y275 285 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 STK24Q9Y6E0 443 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 KRBA1A5PL33 1030 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 E9PMD0 336 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
HMGCL-208ENST00000509389 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 NBL1P41271 181 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 PDXDC1Q6P996 788 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 DCLRE1AQ6PJP8 1040 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
HMGCL-208ENST00000509389 GRASPQ7Z6J2 395 aaPredicted RBP15.97■□□□□ 0.15
HMGCL-208ENST00000509389 DAW1Q8N136 415 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 SPATA20Q8TB22 786 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 PPP1R10Q96QC0 940 aaKnown RBP15.97■□□□□ 0.15
HMGCL-208ENST00000509389 RAB34Q9BZG1 259 aa15.97■□□□□ 0.15
HMGCL-208ENST00000509389 PTPRZ1P23471 2315 aaPredicted RBP15.96■□□□□ 0.15
HMGCL-208ENST00000509389 RIF1Q5UIP0 2472 aaKnown RBP15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CCDC169A6NNP5 214 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 PP2D1A8MPX8 630 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 ANHXE9PGG2 379 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 TMEM189-UBE2V1I3L0A0 370 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 C8AP07357 584 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 HNRNPA1P09651 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGCL-208ENST00000509389 SRFP11831 508 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 FGFR3P22607 806 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 FSHRP23945 695 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 TXLNAP40222 546 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 NPTX2P47972 431 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CLCNKBP51801 687 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 PEX3P56589 373 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 NTHL1P78549 312 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 TMEM119Q4V9L6 283 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 PPM1LQ5SGD2 360 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CD300LGQ6UXG3 332 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 APBB1IPQ7Z5R6 666 aaPredicted RBP15.96■□□□□ 0.15
HMGCL-208ENST00000509389 GAS2L3Q86XJ1 694 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CEP120Q8N960 986 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 ST13P5Q8NFI4 369 aaPredicted RBP15.96■□□□□ 0.15
HMGCL-208ENST00000509389 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 RTP3Q9BQQ7 232 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 CUEDC2Q9H467 287 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 DNM3Q9UQ16 869 aa15.96■□□□□ 0.15
HMGCL-208ENST00000509389 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 HIP1RO75146 1068 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 B3GAT3O94766 335 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 CDC25AP30304 524 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 OR1D2P34982 312 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 HTR4Q13639 388 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 RAB33AQ14088 237 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 KRT79Q5XKE5 535 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 UROC1Q96N76 676 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 ACO2Q99798 780 aaKnown RBP15.95■□□□□ 0.14
HMGCL-208ENST00000509389 CDT1Q9H211 546 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 TMEM134Q9H6X4 195 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 MAGEF1Q9HAY2 307 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 GOLGA2P5Q9HBQ8 144 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 CA14Q9ULX7 337 aa15.95■□□□□ 0.14
HMGCL-208ENST00000509389 SMIM28A0A1B0GU29 152 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 STK25O00506 426 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 CCL16O15467 120 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 HOXA9P31269 272 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 UBA7P41226 1012 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 GRM5P41594 1212 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 OSTNP61366 133 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 MAPK7Q13164 816 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 KARSQ15046 597 aaKnown RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 CAMK4Q16566 473 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 UPP1Q16831 310 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 ZNF568Q3ZCX4 644 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 XKR4Q5GH76 650 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 ALKAL1Q6UXT8 129 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 RSPO2Q6UXX9 243 aaPredicted RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 ASCL5Q7RTU5 278 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 TAS1R3Q7RTX0 852 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 IQUBQ8NA54 791 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 DTWD2Q8NBA8 298 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 C3orf58Q8NDZ4 430 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 SLC7A14Q8TBB6 771 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 GPR152Q8TDT2 470 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 RUSC1Q9BVN2 902 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 MRPL4Q9BYD3 311 aaKnown RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 KMT5AQ9NQR1 393 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 KIAA1468Q9P260 1216 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 ARHGAP28Q9P2N2 729 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 MTRRQ9UBK8 725 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 SERTAD1Q9UHV2 236 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 ZFP37Q9Y6Q3 630 aaPredicted RBP15.94■□□□□ 0.14
HMGCL-208ENST00000509389 NUMBLQ9Y6R0 609 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 CITO14578 2027 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 NOTCH4Q99466 2003 aa15.94■□□□□ 0.14
HMGCL-208ENST00000509389 FAM186AA6NE01 2351 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms