RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 IKZF4Q9H2S9 585 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 SLC2A4RGQ9NR83 387 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.95□□□□□ -0.5
RNF4-212ENST00000509258 ZNF292O60281 2723 aa11.95□□□□□ -0.5
RNF4-212ENST00000509258 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
RNF4-212ENST00000509258 C8AP07357 584 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 FGFR3P22607 806 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 TKTP29401 623 aaKnown RBP11.94□□□□□ -0.5
RNF4-212ENST00000509258 NTHL1P78549 312 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 SPAG1Q07617 926 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 PSMD5Q16401 504 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 UPP1Q16831 310 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 PPM1LQ5SGD2 360 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 SLC39A4Q6P5W5 647 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 POTEHQ6S545 545 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 ERMP1Q7Z2K6 904 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 GPBP1Q86WP2 473 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 CEP57Q86XR8 500 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 SPIRE2Q8WWL2 714 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
RNF4-212ENST00000509258 EPSTI1Q96J88 318 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 CLIC6Q96NY7 704 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
RNF4-212ENST00000509258 CDH7Q9ULB5 785 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 SIT1Q9Y3P8 196 aa11.94□□□□□ -0.5
RNF4-212ENST00000509258 TISP43B9A030 160 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 TMEM189-UBE2V1I3L0A0 370 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 NRG2O14511 850 aaPredicted RBP11.93□□□□□ -0.5
RNF4-212ENST00000509258 FAM189A1O60320 539 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 XYLBO75191 536 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 POU2F2P09086 479 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 MCF2P10911 925 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 SYT1P21579 422 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
RNF4-212ENST00000509258 TNFSF9P41273 254 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 ID4P47928 161 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 NCKAP1LP55160 1127 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 MTSS1LQ765P7 747 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 BRAPQ7Z569 592 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
RNF4-212ENST00000509258 PJA1Q8NG27 643 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 RAD54LQ92698 747 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 SHDQ96IW2 340 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 ANKFY1Q9P2R3 1169 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 TUBGCP4Q9UGJ1 667 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 MTMR6Q9Y217 621 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 DCHS1Q96JQ0 3298 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 WDR87Q6ZQQ6 2873 aa11.93□□□□□ -0.5
RNF4-212ENST00000509258 MIA3Q5JRA6 1907 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 A0A087X0B3 334 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 B3GAT3O94766 335 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 DCNP07585 359 aaKnown RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 CXCL8P10145 99 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 KCNE1P15382 129 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 NMT1P30419 496 aaKnown RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 GUCY2FP51841 1108 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 ZNF131P52739 623 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 YARSP54577 528 aaKnown RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 RTL10Q7L3V2 364 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 SLC7A14Q8TBB6 771 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 FGF13Q92913 245 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 FGF14Q92915 247 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 CDK5RAP3Q96JB5 506 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 AK8Q96MA6 479 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 UROC1Q96N76 676 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 ACAP3Q96P50 834 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 CCDC94Q9BW85 323 aaPredicted RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 C17orf75Q9HAS0 396 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 TOPORSQ9NS56 1045 aaPredicted RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 HCFC1R1Q9NWW0 138 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 DLGAP2Q9P1A6 1054 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 CNTN3Q9P232 1028 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 MTRRQ9UBK8 725 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 KCNG1Q9UIX4 513 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 POLIQ9UNA4 740 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 RBM19Q9Y4C8 960 aaKnown RBP11.92□□□□□ -0.5
RNF4-212ENST00000509258 R4GN57 208 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 DENND4CQ5VZ89 1909 aa11.92□□□□□ -0.5
RNF4-212ENST00000509258 CACNA1IQ9P0X4 2223 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 PODXLO00592 558 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 PPEF2O14830 753 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 CCL16O15467 120 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 OR1D2P34982 312 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 UBA7P41226 1012 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 STARD6P59095 220 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
RNF4-212ENST00000509258 MCL1Q07820 350 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 NOLC1Q14978 699 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNF4-212ENST00000509258 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 PARM1Q6UWI2 310 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 C1orf210Q8IVY1 113 aa11.91□□□□□ -0.5
RNF4-212ENST00000509258 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms