RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FSIP1Q8NA03 581 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 RASSF8Q8NHQ8 419 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 SCFD1Q8WVM8 642 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 PAGE5Q96GU1 130 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 IGSF21Q96ID5 467 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 B3GALT6Q96L58 329 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 ZNF558Q96NG5 402 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 C7orf25Q9BPX7 421 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 CBWD1Q9BRT8 395 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 C11orf84Q9BUA3 381 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 PRDM9Q9NQV7 894 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 OLFML3Q9NRN5 406 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 CNTN3Q9P232 1028 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 KCNH3Q9ULD8 1083 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 GDAQ9Y2T3 454 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 GIT1Q9Y2X7 761 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 STYXL1Q9Y6J8 313 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
TOPBP1-207ENST00000509162 TRIOO75962 3097 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 A0A0B4J269 797 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 A0A1W2PQ27 194 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 A0A1W2PQ64 194 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 A0A1W2PQD8 194 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 K7ERI5 159 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 NRP1O14786 923 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 TGFB1I1O43294 461 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 TOM1L1O75674 476 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PRPF6O94906 941 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 RB1P06400 928 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 ADRB2P07550 413 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 FBXO45P0C2W1 286 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 MCF2P10911 925 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 AFMP43652 599 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 MMP16P51512 607 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 KCNQ1P51787 676 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 GRIK3Q13003 919 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PTPN14Q15678 1187 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PKDCCQ504Y2 493 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 L1TD1Q5T7N2 865 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 ADALQ6DHV7 355 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 FAM43BQ6ZT52 329 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 THNSL1Q8IYQ7 743 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 CXorf38Q8TB03 319 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PLEKHO2Q8TD55 490 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 HASPINQ8TF76 798 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 MRPS27Q92552 414 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 ERCC4Q92889 916 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 HERC2P3Q9BVR0 1158 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PLVAPQ9BX97 442 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 MRPL9Q9BYD2 267 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 NSUN3Q9H649 340 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 PANK4Q9NVE7 773 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 CLEC1BQ9P126 229 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
TOPBP1-207ENST00000509162 SMIM28A0A1B0GU29 152 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TTC26A0AVF1 554 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 I3L4J1 428 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 HNRNPDLO14979 420 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 PER2O15055 1255 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 ADAM12O43184 909 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 KRT18P05783 430 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 NFICP08651 508 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 IDEP14735 1019 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 KCNE1P15382 129 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 GAP43P17677 238 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TXLNAP40222 546 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 ASIC1P78348 528 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 NUCB2P80303 420 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 STK4Q13043 487 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 BMT2Q1RMZ1 405 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TIGD5Q53EQ6 642 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 RTP2Q5QGT7 225 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 RSPO2Q6UXX9 243 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 UNC13DQ70J99 1090 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 SND1Q7KZF4 910 aaKnown RBP eCLIP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 ABI1Q8IZP0 508 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 PGBD4Q96DM1 585 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 SAAL1Q96ER3 474 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 USB1Q9BQ65 265 aaKnown RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TMEM175Q9BSA9 504 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TRIM6Q9C030 488 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 LMAN2LQ9H0V9 348 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 CUEDC2Q9H467 287 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 UBE2ZQ9H832 354 aaPredicted RBP7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 LMCD1Q9NZU5 365 aa7.87□□□□□ -1.15
TOPBP1-207ENST00000509162 LARSQ9P2J5 1176 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms