RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 MSTO1Q9BUK6 570 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 PLEKHA4Q9H4M7 779 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 NUB1Q9Y5A7 615 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 CLUHO75153 1309 aa16.15■□□□□ 0.18
UBE2D3-228ENST00000508974 ANKRD63C9JTQ0 380 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 N4BP1O75113 896 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 ZMYND10O75800 440 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 CLTAP09496 248 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 MCM4P33991 863 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 GUCY2FP51841 1108 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 ARPP19P56211 112 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 PPP2R3AQ06190 1150 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 SIGLEC14Q08ET2 396 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 LIN9Q5TKA1 542 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 PDXDC1Q6P996 788 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 SV2BQ7L1I2 683 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 GET4Q7L5D6 327 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 OTOP3Q7RTS5 596 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 GPR65Q8IYL9 337 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 ZDHHC14Q8IZN3 488 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 MTRRQ9UBK8 725 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 FBXW11Q9UKB1 542 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 POLIQ9UNA4 740 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 USTQ9Y2C2 406 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
UBE2D3-228ENST00000508974 WDFY4Q6ZS81 3184 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 LACTBL1A8MY62 500 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 SPTLC2O15270 562 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 OGTO15294 1046 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 CCL16O15467 120 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 PIGRP01833 764 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 C8AP07357 584 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 IDEP14735 1019 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 NTHL1P78549 312 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 GTF2BQ00403 316 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 MAP4K3Q8IVH8 894 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 LINC00301Q8NCQ3 95 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 ST13P5Q8NFI4 369 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 SLC7A14Q8TBB6 771 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 HDAC7Q8WUI4 952 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 STAMQ92783 540 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 ZNF396Q96N95 335 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 PRKD2Q9BZL6 878 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 MRPL44Q9H9J2 332 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 WDR6Q9NNW5 1121 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
UBE2D3-228ENST00000508974 DOCK8Q8NF50 2099 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 TTC26A0AVF1 554 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 FAM189A1O60320 539 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 PDGFBP01127 241 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 ACOT2P49753 483 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 PKP1Q13835 747 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 VARS2Q5ST30 1063 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 ANKS3Q6ZW76 656 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 GRASPQ7Z6J2 395 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 DNAJC19Q96DA6 116 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 FAM122AQ96E09 287 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 MFSD14AQ96MC6 490 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 MYADMQ96S97 322 aa16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 RPF1Q9H9Y2 349 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-228ENST00000508974 TCHHQ07283 1943 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 A0A0B4J269 797 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 KCNA1Q09470 495 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 RAB33AQ14088 237 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 SUGP1Q8IWZ8 645 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 PLEKHA5Q9HAU0 1116 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 ZNF318Q5VUA4 2279 aa16.11■□□□□ 0.17
UBE2D3-228ENST00000508974 PPEF2O14830 753 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 GCNT3O95395 438 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 F13A1P00488 732 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 C1RP00736 705 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 GAP43P17677 238 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 SCP2P22307 547 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 PLA2G5P39877 138 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 CASP5P51878 434 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 ROR1Q01973 937 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 KYAT1Q16773 422 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 CTXN3Q4LDR2 81 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 CYP26C1Q6V0L0 522 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 ZNF720Q7Z2F6 126 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 FBXL6Q8N531 539 aa16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-228ENST00000508974 KCNN1Q92952 543 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms