RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 SRPRBQ9Y5M8 271 aaKnown RBP24.09■■□□□ 1.45
PACRGL-220ENST00000508952 CCL16O15467 120 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 CLTAP09496 248 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 NMT1P30419 496 aaKnown RBP24.08■■□□□ 1.45
PACRGL-220ENST00000508952 RPL9P32969 192 aaKnown RBP24.08■■□□□ 1.45
PACRGL-220ENST00000508952 DDIT3P35638 169 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 TDGQ13569 410 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 ZBTB41Q5SVQ8 909 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 GRASPQ7Z6J2 395 aaPredicted RBP24.08■■□□□ 1.45
PACRGL-220ENST00000508952 PRSS33Q8NF86 280 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 SLC7A14Q8TBB6 771 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 FIZ1Q96SL8 496 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 NUB1Q9Y5A7 615 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 BACE2Q9Y5Z0 518 aa24.08■■□□□ 1.45
PACRGL-220ENST00000508952 MYH15Q9Y2K3 1946 aa24.08■■□□□ 1.44
PACRGL-220ENST00000508952 PIGRP01833 764 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 HNRNPA1P09651 372 aaKnown RBP eCLIP24.07■■□□□ 1.44
PACRGL-220ENST00000508952 NTHL1P78549 312 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 NHLH1Q02575 133 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 VARS2Q5ST30 1063 aaKnown RBP24.07■■□□□ 1.44
PACRGL-220ENST00000508952 AXDND1Q5T1B0 1012 aaPredicted RBP24.07■■□□□ 1.44
PACRGL-220ENST00000508952 SLC39A4Q6P5W5 647 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 DYMQ7RTS9 669 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 USP28Q96RU2 1077 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 EPS15L1Q9UBC2 864 aa24.07■■□□□ 1.44
PACRGL-220ENST00000508952 TTC26A0AVF1 554 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 STX6O43752 255 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 FAM189A1O60320 539 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 AVPR2P30518 371 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 ZC2HC1CQ53FD0 456 aaPredicted RBP24.06■■□□□ 1.44
PACRGL-220ENST00000508952 IGSF9Q9P2J2 1179 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 CCDC39Q9UFE4 941 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 POLIQ9UNA4 740 aa24.06■■□□□ 1.44
PACRGL-220ENST00000508952 NARSO43776 548 aaKnown RBP24.05■■□□□ 1.44
PACRGL-220ENST00000508952 SCP2P22307 547 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 FSHRP23945 695 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 MCM4P33991 863 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 GTF2BQ00403 316 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 ENOX2Q16206 610 aaKnown RBP24.05■■□□□ 1.44
PACRGL-220ENST00000508952 KRI1Q8N9T8 703 aaKnown RBP24.05■■□□□ 1.44
PACRGL-220ENST00000508952 ST13P5Q8NFI4 369 aaPredicted RBP24.05■■□□□ 1.44
PACRGL-220ENST00000508952 KIF12Q96FN5 646 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 SUSD3Q96L08 255 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 MSTO1Q9BUK6 570 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 PLEKHA5Q9HAU0 1116 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.05■■□□□ 1.44
PACRGL-220ENST00000508952 STK17AQ9UEE5 414 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 DUSP12Q9UNI6 340 aa24.05■■□□□ 1.44
PACRGL-220ENST00000508952 LACTBL1A8MY62 500 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 TISP43B9A030 160 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 ANKRD63C9JTQ0 380 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 SYN3O14994 580 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 OGTO15294 1046 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 LAMP2P13473 410 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 HOXA9P31269 272 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 HOXD11P31277 338 aaPredicted RBP24.04■■□□□ 1.44
PACRGL-220ENST00000508952 TXLNAP40222 546 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 ARPP19P56211 112 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 ROR1Q01973 937 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 PPP2R3AQ06190 1150 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 RRAGBQ5VZM2 374 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 SFR1Q86XK3 245 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 MAP4K3Q8IVH8 894 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 ZSCAN16Q9H4T2 348 aaPredicted RBP24.04■■□□□ 1.44
PACRGL-220ENST00000508952 HCFC1R1Q9NWW0 138 aa24.04■■□□□ 1.44
PACRGL-220ENST00000508952 NOTCH4Q99466 2003 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 A0A0B4J269 797 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 XYLBO75191 536 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 GUCY2FP51841 1108 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 SLC39A14Q15043 492 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 KYAT1Q16773 422 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 SLC8B1Q6J4K2 584 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 DDX12PQ92771 950 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 PANK2Q9BZ23 570 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 IKZF4Q9H2S9 585 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 MFSD1Q9H3U5 465 aa24.03■■□□□ 1.44
PACRGL-220ENST00000508952 RPF1Q9H9Y2 349 aaKnown RBP24.03■■□□□ 1.44
PACRGL-220ENST00000508952 ANK1P16157 1881 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 PIEZO1Q92508 2521 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 WDR27A2RRH5 827 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 MYMKA6NI61 221 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 TBC1D4O60343 1298 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 MRPL58Q14197 206 aaKnown RBP24.02■■□□□ 1.44
PACRGL-220ENST00000508952 ZBTB6Q15916 424 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 UVSSAQ2YD98 709 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 SV2BQ7L1I2 683 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 FAM212AQ96EL1 285 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 FBXL5Q9UKA1 691 aa24.02■■□□□ 1.44
PACRGL-220ENST00000508952 UBQLN1Q9UMX0 589 aaKnown RBP24.02■■□□□ 1.44
PACRGL-220ENST00000508952 A0A087X0B3 334 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 H7C4K7 107 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 LRPAP1P30533 357 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 TCF15Q12870 199 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 HTR4Q13639 388 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 CTXN3Q4LDR2 81 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 SLC44A3Q8N4M1 653 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 TMEM105Q8N8V8 129 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 ZNF461Q8TAF7 563 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 ITFG1Q8TB96 612 aa24.01■■□□□ 1.43
PACRGL-220ENST00000508952 DNAJC19Q96DA6 116 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms