RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 REXO1L1PQ8IX06 675 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 CLRN3Q8NCR9 226 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 UHMK1Q8TAS1 419 aaKnown RBP4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 ASB2Q96Q27 587 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 RMDN3Q96TC7 470 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 ABCG4Q9H172 646 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 FAM204AQ9H8W3 233 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 STAP2Q9UGK3 403 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 PA2G4Q9UQ80 394 aaKnown RBP4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 TMEM98Q9Y2Y6 226 aa4.92□□□□□ -1.62
SMARCA5-202ENST00000508573 BLACEA4D250 179 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ACOT7O00154 380 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 XPOTO43592 962 aaKnown RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 NCK2O43639 380 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 NARSO43776 548 aaKnown RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 AHCYL1O43865 530 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 EFCAB14O75071 495 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 DHRS4L1P0CG22 281 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ATP1A3P13637 1013 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 CR2P20023 1033 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 GRK2P25098 689 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 KIF5BP33176 963 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 MCM7P33993 719 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 GRK3P35626 688 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 MAN2A2P49641 1150 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ZNF132P52740 706 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 RRADP55042 308 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 PTH1RQ03431 593 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 FAPQ12884 760 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 LRRC32Q14392 662 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ATAT1Q5SQI0 421 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 HECTD3Q5T447 861 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ANKRD45Q5TZF3 282 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 FAM205BPQ63HN1 556 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 ABHD17CQ6PCB6 329 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 RSPO2Q6UXX9 243 aaPredicted RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 LBX2Q6XYB7 198 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 KIF18BQ86Y91 864 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 TMTC1Q8IUR5 882 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 CMIPQ8IY22 773 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 TEX11Q8IYF3 940 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 TEX9Q8N6V9 391 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 PCYOX1LQ8NBM8 494 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 DIS3LQ8TF46 1054 aaKnown RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 DCAF4Q8WV16 495 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 HPS3Q969F9 1004 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 MAGEB10Q96LZ2 347 aaPredicted RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 TEKT5Q96M29 485 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 MAP3K14Q99558 947 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 LSM14BQ9BX40 385 aaKnown RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 BRD9Q9H8M2 597 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 UBN1Q9NPG3 1134 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 SPTLC3Q9NUV7 552 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 MRFAP1Q9Y605 127 aa4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 WDR33Q9C0J8 1336 aaKnown RBP4.91□□□□□ -1.62
SMARCA5-202ENST00000508573 KLHL33A6NCF5 533 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 CBX4O00257 560 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 P4HA2O15460 535 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 CDC14BO60729 498 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 H2AFYO75367 372 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 TUSC2O75896 110 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 RAD17O75943 681 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 TBX18O95935 607 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 DNTTP04053 509 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 ZBTB48P10074 688 aaPredicted RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 AKR1B1P15121 316 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 TNFSF4P23510 183 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 STAT1P42224 750 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 LSSP48449 732 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 TUBP50607 506 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 FXR1P51114 621 aaKnown RBP eCLIP4.9□□□□□ -1.631e-6■■■□□ 19
SMARCA5-202ENST00000508573 DCTN1Q14203 1278 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 SMC1AQ14683 1233 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 SART3Q15020 963 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 PTPN14Q15678 1187 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 DDB1Q16531 1140 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 SMN1Q16637 294 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 ANO4Q32M45 955 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 CPLX2Q6PUV4 134 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 DPP8Q6V1X1 898 aaPredicted RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 KCTD1Q719H9 257 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 DPP9Q86TI2 863 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 EGFL6Q8IUX8 553 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 COLGALT2Q8IYK4 626 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 KRT78Q8N1N4 520 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 CARNMT1Q8N4J0 409 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 ESX1Q8N693 406 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 OR8H1Q8NGG4 311 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 ASB12Q8WXK4 309 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 NT5C1BQ96P26 610 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 PLEKHG4BQ96PX9 1271 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 OR14A2Q96R54 314 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 DPYSL5Q9BPU6 564 aa4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 GTPBP4Q9BZE4 634 aaKnown RBP4.9□□□□□ -1.63
SMARCA5-202ENST00000508573 IKZF4Q9H2S9 585 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms