RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ACAP3Q96P50 834 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 UHRF1Q96T88 793 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 TOPORSQ9NS56 1045 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 HSFX1Q9UBD0 423 aa5.99□□□□□ -1.45
TRAPPC13-209ENST00000508304 GSG1L2A8MUP6 293 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 ADRM1Q16186 407 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 ATP13A4Q4VNC1 1196 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 SEM1Q6ZVN7 128 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 HASPINQ8TF76 798 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 MARS2Q96GW9 593 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 FEZ1Q99689 392 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 LANCL2Q9NS86 450 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 PLAAQ9Y263 795 aa5.98□□□□□ -1.45
TRAPPC13-209ENST00000508304 GPD1P21695 349 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 SF3B3Q15393 1217 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 FAM180AQ6UWF9 173 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 Q8NA96 180 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 DDB2Q92466 427 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 MED15Q96RN5 788 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 MYOCQ99972 504 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 SENP6Q9GZR1 1112 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 CPNE5Q9HCH3 593 aa5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 MRPL42Q9Y6G3 142 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-209ENST00000508304 TRGV11A0A075B6L2 103 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 CCDC151A5D8V7 595 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 MANSC4A6NHS7 340 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 FPR1P21462 350 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 MAPK10P53779 464 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 PER3P56645 1201 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 CCT2P78371 535 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 MRPS9P82933 396 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 VWA1Q6PCB0 445 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 NOP9Q86U38 636 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 NUP133Q8WUM0 1156 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 AUTS2Q8WXX7 1259 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 PNKPQ96T60 521 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 GREM2Q9H772 168 aa5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 RBM12Q9NTZ6 932 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-209ENST00000508304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 IKBKBO14920 756 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 YY2O15391 372 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 MPPED1O15442 326 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 PROM1O43490 865 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 ORC4O43929 436 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 SRGNP10124 158 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 BPIP17213 487 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 ITPKBP27987 946 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 NOMO3P69849 1222 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 PPP3CAQ08209 521 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 NOMO1Q15155 1222 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 NOMO2Q5JPE7 1267 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 UBE3BQ7Z3V4 1068 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 PEG10Q86TG7 708 aaKnown RBP5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 FATE1Q969F0 183 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 MFSD3Q96ES6 412 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 LDAHQ9H6V9 325 aa5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 AJAP1Q9UKB5 411 aaPredicted RBP5.95□□□□□ -1.46
TRAPPC13-209ENST00000508304 TEX33O43247 280 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 PRKCGP05129 697 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 ELFN1P0C7U0 828 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 GRIA3P42263 894 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 SOX10P56693 466 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 SLFN5Q08AF3 891 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 EZH2Q15910 746 aaKnown RBP5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 MUM1Q2TAK8 710 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 KAZNQ674X7 775 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 PDPRQ8NCN5 879 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 CLRN3Q8NCR9 226 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 ACTL7AQ9Y615 435 aa5.94□□□□□ -1.46
TRAPPC13-209ENST00000508304 ALAS1P13196 640 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 PCSK1P29120 753 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 SESN3P58005 492 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 SSBP2P81877 361 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 NBPF8Q3BBV2 869 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 DALRD3Q5D0E6 543 aaKnown RBP5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 MUM1L1Q5H9M0 696 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 TSTD2Q5T7W7 516 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 JAZF1Q86VZ6 243 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 FITM2Q8N6M3 262 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 IFT122Q9HBG6 1241 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 DMRT3Q9NQL9 472 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 AOX1Q06278 1338 aa5.93□□□□□ -1.46
TRAPPC13-209ENST00000508304 KCNAB3O43448 404 aa5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 SRSF7Q16629 238 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 FCRLBQ6BAA4 426 aa5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 KCNK18Q7Z418 384 aa5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 LEO1Q8WVC0 666 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 SLKQ9H2G2 1235 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 FLRT1Q9NZU1 646 aa5.92□□□□□ -1.46
TRAPPC13-209ENST00000508304 A0A1W2PS29 197 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 CDHR4A6H8M9 788 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 ULK1O75385 1050 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 ENDOD1O94919 500 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 FCER1AP12319 257 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 SLC6A9P48067 706 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 ANO4Q32M45 955 aa5.91□□□□□ -1.46
TRAPPC13-209ENST00000508304 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms