RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MRPS26Q9BYN8 205 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 ISCUQ9H1K1 167 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 MARCH7Q9H992 704 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 WASH6PQ9NQA3 447 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 SEPT11Q9NVA2 429 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 PCDHA7Q9UN72 937 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 TDRD9Q8NDG6 1382 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 F8W8V4 182 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF701M0R085 212 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 GPR37O15354 613 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM153BP0C7A2 387 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SMIM18P0DKX4 95 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 PSMA4P25789 261 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC5A2P31639 672 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CARSP49589 748 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 PTGDRQ13258 359 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM153CQ494X1 144 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 POTEGQ6S5H5 508 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 UNC5DQ6UXZ4 953 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 STOX1Q6ZVD7 989 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FRA10AC1Q70Z53 315 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM83AQ86UY5 434 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 NME9Q86XW9 330 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 MDM1Q8TC05 714 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TTC17Q96AE7 1141 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM149B1Q96BN6 582 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ACAP3Q96P50 834 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 VPS35Q96QK1 796 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CLPBQ9H078 707 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 POLD4Q9HCU8 107 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 KMT5AQ9NQR1 393 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 DIABLOQ9NR28 239 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 NCKIPSDQ9NZQ3 722 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC7A8Q9UHI5 535 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM153AQ9UHL3 310 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 DNAJC12Q9UKB3 198 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 NFU1Q9UMS0 254 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 HYOU1Q9Y4L1 999 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SPEF1Q9Y4P9 236 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CAMSAP1Q5T5Y3 1602 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 MYO3AQ8NEV4 1616 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 MYH11P35749 1972 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 KDM3AQ9Y4C1 1321 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TEX51A0A1B0GUA7 166 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 FAM172BPA6NC97 362 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TRIM77I1YAP6 450 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CASQ2O14958 399 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ZW10O43264 779 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ACSL4O60488 711 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 RNASEH1O60930 286 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SULT1C4O75897 302 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 PSMG1O95456 288 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CHN1P15882 459 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 PAFAH1B1P43034 410 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 GPD2P43304 727 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ME1P48163 572 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 COG7P83436 770 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ASPHQ12797 758 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 UBE4AQ14139 1066 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 UAP1Q16222 522 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CCDC58Q4VC31 144 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF704Q6ZNC4 412 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 KCTD20Q7Z5Y7 419 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 GPR141Q7Z602 305 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ARRDC4Q8NCT1 418 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 GIMAP8Q8ND71 665 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC2A14Q8TDB8 520 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TBC1D20Q96BZ9 403 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CAPZA3Q96KX2 299 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 CCDC77Q9BR77 488 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 PHF20Q9BVI0 1012 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TBC1D10AQ9BXI6 508 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ADAM7Q9H2U9 754 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 LIN7BQ9HAP6 207 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC38A7Q9NVC3 462 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 TRNAU1APQ9NX07 287 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 ANAPC5Q9UJX4 755 aa11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-210ENST00000508216 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 PNPLA7Q6ZV29 1317 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ITSN1Q15811 1721 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 DIP2BQ9P265 1576 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 OR5K3A6NET4 321 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms