RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZSCAN5CA6NGD5 496 aaPredicted RBP18.9■□□□□ 0.62
SFXN1-208ENST00000507823 CCL15Q16663 113 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 EFCAB12Q6NXP0 572 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 PPP1R2P3Q6NXS1 205 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 RHPN2Q8IUC4 686 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 WHAMMQ8TF30 809 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 TRAPPC12Q8WVT3 735 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 HINFPQ9BQA5 517 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 PSD3Q9NYI0 1048 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 EVPLQ92817 2033 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 MAGEB2O15479 319 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 B4GALT4O60513 344 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 KRT35Q92764 455 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 VCPIP1Q96JH7 1222 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 CNOT8Q9UFF9 292 aaKnown RBP18.9■□□□□ 0.62
SFXN1-208ENST00000507823 PCDHA3Q9Y5H8 950 aa18.9■□□□□ 0.62
SFXN1-208ENST00000507823 CCDC66A2RUB6 948 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 ATMINO43313 823 aaPredicted RBP18.89■□□□□ 0.62
SFXN1-208ENST00000507823 HOXC6P09630 235 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 POTEJP0CG39 1038 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 ECHS1P30084 290 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 GRB14Q14449 540 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 SEZ6Q53EL9 994 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 HSP90B2PQ58FF3 399 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 ALS2CLQ60I27 953 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 MAATS1Q7Z4T9 603 aa18.89■□□□□ 0.62
SFXN1-208ENST00000507823 DDX47Q9H0S4 455 aaKnown RBP18.89■□□□□ 0.62
SFXN1-208ENST00000507823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.62
SFXN1-208ENST00000507823 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.89■□□□□ 0.62
SFXN1-208ENST00000507823 MESDQ14696 234 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 ATF7IP2Q5U623 682 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 MON1BQ7L1V2 547 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 CCDC26Q8TAB7 109 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 SH3GL2Q99962 352 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 NFU1Q9UMS0 254 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 UMODL1Q5DID0 1318 aa18.89■□□□□ 0.61
SFXN1-208ENST00000507823 SNAI1O95863 264 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 DUOXA2Q1HG44 320 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 MAP1SQ66K74 1059 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 ZBTB33Q86T24 672 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 PHF13Q86YI8 300 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 EXOC4Q96A65 974 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 GDAP1L1Q96MZ0 367 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 IFT122Q9HBG6 1241 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 CST3P01034 146 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 INSRRP14616 1297 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 CLCN3P51790 818 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 NOMO3P69849 1222 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 RBBP8NLQ8NC74 664 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 TSEN2Q8NCE0 465 aaKnown RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 CCDC102AQ96A19 550 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 FAXDC2Q96IV6 333 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
SFXN1-208ENST00000507823 NR2E1Q9Y466 385 aa18.88■□□□□ 0.61
SFXN1-208ENST00000507823 ESYT3A0FGR9 886 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 PHACTR2O75167 634 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
SFXN1-208ENST00000507823 AMHR2Q16671 573 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 IMPG2Q9BZV3 1241 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 MINDY3Q9H8M7 445 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 FAN1Q9Y2M0 1017 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 GOLGA6BA6NDN3 693 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 PPFIA4O75335 1185 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 CALCAP01258 141 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 MARCKSL1P49006 195 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 SGSM1Q2NKQ1 1148 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 SCARA3Q6AZY7 606 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 TMEM270Q6UE05 265 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 CDT1Q9H211 546 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-208ENST00000507823 CHORDC1Q9UHD1 332 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-208ENST00000507823 ADAM21Q9UKJ8 722 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 MGAMO43451 1857 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 GJB1P08034 283 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 FAM153BP0C7A2 387 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 GNA15P30679 374 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 GGCXP38435 758 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 PTP4A2Q12974 167 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 FAM153CQ494X1 144 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 SPRYD7Q5W111 196 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 EEF1DP3Q658K8 133 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 EFCAB13Q8IY85 973 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 IQCKQ8N0W5 287 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 NLRP4Q96MN2 994 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 MTMR12Q9C0I1 747 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 NIF3L1Q9GZT8 377 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 GBA2Q9HCG7 927 aaPredicted RBP18.87■□□□□ 0.61
SFXN1-208ENST00000507823 AMACRQ9UHK6 382 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 FAM153AQ9UHL3 310 aa18.87■□□□□ 0.61
SFXN1-208ENST00000507823 MROH7Q68CQ1 1323 aa18.86■□□□□ 0.61
SFXN1-208ENST00000507823 GOLGA6L10A0A0M3HER8 536 aa18.86■□□□□ 0.61
SFXN1-208ENST00000507823 TULP1O00294 542 aaPredicted RBP18.86■□□□□ 0.61
SFXN1-208ENST00000507823 IL18RAPO95256 599 aa18.86■□□□□ 0.61
SFXN1-208ENST00000507823 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
SFXN1-208ENST00000507823 CYP2C19P33261 490 aa18.86■□□□□ 0.61
SFXN1-208ENST00000507823 HSPA9P38646 679 aaKnown RBP18.86■□□□□ 0.61
SFXN1-208ENST00000507823 PHKA2P46019 1235 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms