RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 CASKIN2Q8WXE0 1202 aa6.33□□□□□ -1.4
LINC01088-203ENST00000507476 AIFM2Q9BRQ8 373 aa6.33□□□□□ -1.4
LINC01088-203ENST00000507476 HSFX1Q9UBD0 423 aa6.33□□□□□ -1.4
LINC01088-203ENST00000507476 LRRC3CA6NJW4 275 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 RBMXL2O75526 392 aaKnown RBP6.32□□□□□ -1.4
LINC01088-203ENST00000507476 GPR3P46089 330 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 VAV2P52735 878 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 MRPS35P82673 323 aaKnown RBP6.32□□□□□ -1.4
LINC01088-203ENST00000507476 NHLH1Q02575 133 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 ARHGEF25Q86VW2 580 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 MARS2Q96GW9 593 aaKnown RBP6.32□□□□□ -1.4
LINC01088-203ENST00000507476 ADI1Q9BV57 179 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
LINC01088-203ENST00000507476 ENDOD1O94919 500 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 AMY1AP04745 511 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 CDK4P11802 303 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 CKBP12277 381 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 ATXN1P54253 815 aaKnown RBP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 NOMO3P69849 1222 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 MGAT2Q10469 447 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 MTM1Q13496 603 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 SP5Q6BEB4 398 aaPredicted RBP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 GLCCI1Q86VQ1 547 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 AFAP1L2Q8N4X5 818 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 ZGPATQ8N5A5 531 aaKnown RBP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 OR2I1PQ8NGU4 316 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 PTCD3Q96EY7 689 aaKnown RBP6.31□□□□□ -1.4
LINC01088-203ENST00000507476 CAAP1Q9H8G2 361 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 C14orf119Q9NWQ9 140 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 KCTD5Q9NXV2 234 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 LRIT1Q9P2V4 623 aa6.31□□□□□ -1.4
LINC01088-203ENST00000507476 BRINP1O60477 761 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 MTNR1BP49286 362 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 STAT4Q14765 748 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 GEN1Q17RS7 908 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 FOXR2Q6PJQ5 311 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 LNX2Q8N448 690 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 ZNF384Q8TF68 577 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 NAF1Q96HR8 494 aaKnown RBP6.3□□□□□ -1.4
LINC01088-203ENST00000507476 CCM2LQ9NUG4 571 aaPredicted RBP6.3□□□□□ -1.4
LINC01088-203ENST00000507476 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 RUVBL1Q9Y265 456 aaKnown RBP6.3□□□□□ -1.4
LINC01088-203ENST00000507476 TMA7Q9Y2S6 64 aaKnown RBP6.3□□□□□ -1.4
LINC01088-203ENST00000507476 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
LINC01088-203ENST00000507476 PCDHGA2Q9Y5H1 932 aa6.3□□□□□ -1.4
LINC01088-203ENST00000507476 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 TEX33O43247 280 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 GPR32O75388 356 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 SLFN5Q08AF3 891 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 FOXF2Q12947 444 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 LHFPL2Q6ZUX7 228 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 Q8NA96 180 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 SSH3Q8TE77 659 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 KLK15Q9H2R5 256 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 ZBTB21Q9ULJ3 1066 aa6.29□□□□□ -1.4
LINC01088-203ENST00000507476 ARHGEF17Q96PE2 2063 aaPredicted RBP6.29□□□□□ -1.4
LINC01088-203ENST00000507476 EYA4O95677 639 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 OSMP13725 252 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 SOX5P35711 763 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 TMPRSS15P98073 1019 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 TAF7LQ5H9L4 462 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 PAPD7Q5XG87 772 aaKnown RBP6.28□□□□□ -1.4
LINC01088-203ENST00000507476 FITM2Q8N6M3 262 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 NUP133Q8WUM0 1156 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
LINC01088-203ENST00000507476 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
LINC01088-203ENST00000507476 ALAS1P13196 640 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 SLC5A3P53794 718 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
LINC01088-203ENST00000507476 SRRM1Q8IYB3 904 aaKnown RBP6.27□□□□□ -1.41
LINC01088-203ENST00000507476 COLGALT2Q8IYK4 626 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 AHCYL2Q96HN2 611 aaKnown RBP6.27□□□□□ -1.41
LINC01088-203ENST00000507476 PNKPQ96T60 521 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 SLC17A6Q9P2U8 582 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 DMTF1Q9Y222 760 aa6.27□□□□□ -1.41
LINC01088-203ENST00000507476 PRKD3O94806 890 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 SF3B3Q15393 1217 aaKnown RBP6.26□□□□□ -1.41
LINC01088-203ENST00000507476 CHAC2Q8WUX2 184 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 MED15Q96RN5 788 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 WDR26Q9H7D7 661 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 IL17RBQ9NRM6 502 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 ASB6Q9NWX5 421 aa6.26□□□□□ -1.41
LINC01088-203ENST00000507476 FAM171A2A8MVW0 826 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 PROP1O75360 226 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 FCER1AP12319 257 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 DDCP20711 480 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 SLC6A4P31645 630 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
LINC01088-203ENST00000507476 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.25□□□□□ -1.41
LINC01088-203ENST00000507476 NOL8Q76FK4 1167 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms