RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MXI1P50539 228 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 BIRC2Q13490 618 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 TMED2Q15363 201 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 THEMIS2Q5TEJ8 643 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 C4orf50Q6ZRC1 276 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 ZNF365Q70YC5 407 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 SLC51AQ86UW1 340 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 SLC47A2Q86VL8 602 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 CERKQ8TCT0 537 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 IFT43Q96FT9 208 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 DDX27Q96GQ7 796 aaKnown RBP18.86■□□□□ 0.61
NUP54-205ENST00000507257 GMCL1Q96IK5 515 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 SYT15Q9BQS2 421 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 COQ4Q9Y3A0 265 aa18.86■□□□□ 0.61
NUP54-205ENST00000507257 F5H6K3 240 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 NDC80O14777 642 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 CYP26A1O43174 497 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 ZBED4O75132 1171 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 ZWINTO95229 277 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 MYBL1P10243 752 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 KLRC2P26717 231 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 EPHB2P29323 1055 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 MAPK4P31152 587 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 RAB27AP51159 221 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 IZUMO3Q5VZ72 239 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 SEPT14Q6ZU15 432 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 SLC17A8Q8NDX2 589 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 GMCL1P1Q8NEA9 526 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 CYP2W1Q8TAV3 490 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 TEKT4Q8WW24 435 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 ATG4AQ8WYN0 398 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 DDX1Q92499 740 aaKnown RBP18.85■□□□□ 0.61
NUP54-205ENST00000507257 TRIM11Q96F44 468 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 TRAPPC9Q96Q05 1148 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 TMEM117Q9H0C3 514 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 TRABDQ9H4I3 376 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.85■□□□□ 0.61
NUP54-205ENST00000507257 FETUBQ9UGM5 382 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 LTBP1Q14766 1721 aa18.85■□□□□ 0.61
NUP54-205ENST00000507257 EXOC1LA0A1B0GW35 172 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 NVLO15381 856 aaKnown RBP18.84■□□□□ 0.61
NUP54-205ENST00000507257 GRIN3BO60391 1043 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 SMIM24O75264 130 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
NUP54-205ENST00000507257 SP100P23497 879 aaPredicted RBP18.84■□□□□ 0.61
NUP54-205ENST00000507257 ADSSP30520 456 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 GCLMP48507 274 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 TRAF1Q13077 416 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 CLEC16AQ2KHT3 1053 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 CTC1Q2NKJ3 1217 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 MTHFD1LQ6UB35 978 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 DAW1Q8N136 415 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 KAT5Q92993 513 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 ACCSQ96QU6 501 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 SMC6Q96SB8 1091 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 WDR11Q9BZH6 1224 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 KIAA1586Q9HCI6 787 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 SLC24A2Q9UI40 661 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 SIPA1L1O43166 1804 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 C6orf229H3BNL8 230 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 PSTPIP1O43586 416 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 TYROBPO43914 113 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 GPC3P51654 580 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 TNIP1Q15025 636 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 B3GNT9Q6UX72 402 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 C9orf72Q96LT7 481 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 RBM15Q96T37 977 aaKnown RBP eCLIP18.84■□□□□ 0.613e-11■■■■■ 43.2
NUP54-205ENST00000507257 WDR18Q9BV38 432 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 ST6GALNAC4Q9H4F1 302 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 DNAJC17Q9NVM6 304 aaKnown RBP18.84■□□□□ 0.61
NUP54-205ENST00000507257 ZFP69BQ9UJL9 534 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 ANAPC7Q9UJX3 599 aa18.84■□□□□ 0.61
NUP54-205ENST00000507257 LRRC37AA6NMS7 1700 aa18.83■□□□□ 0.61
NUP54-205ENST00000507257 HGSO14964 777 aaPredicted RBP18.83■□□□□ 0.6
NUP54-205ENST00000507257 MUM1Q2TAK8 710 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 NBPF20Q3BBV1 942 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 FYB2Q5VWT5 728 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 NLRP9Q7RTR0 991 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 RDH13Q8NBN7 331 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 SUPT20HQ8NEM7 779 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 HERPUD2Q9BSE4 406 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 MMADHCQ9H3L0 296 aaPredicted RBP18.83■□□□□ 0.6
NUP54-205ENST00000507257 SLCO1B3Q9NPD5 702 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 LARSQ9P2J5 1176 aaKnown RBP18.83■□□□□ 0.6
NUP54-205ENST00000507257 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.83■□□□□ 0.6
NUP54-205ENST00000507257 NFASCO94856 1347 aa18.83■□□□□ 0.6
NUP54-205ENST00000507257 GSTTP1A0A1W2PQM5 241 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 CCDC22O60826 627 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 GNAT1P11488 350 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 SKIP12755 728 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 ZRSR2Q15696 482 aaKnown RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 OR52E8Q6IFG1 317 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 TMEM154Q6P9G4 183 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 DRICH1Q6PGQ1 229 aaPredicted RBP18.82■□□□□ 0.6
NUP54-205ENST00000507257 CLNKQ7Z7G1 428 aa18.82■□□□□ 0.6
NUP54-205ENST00000507257 TTC8Q8TAM2 541 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms