RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 GPR149Q86SP6 731 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 RASSF3Q86WH2 238 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 SLC41A1Q8IVJ1 513 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 DRC7Q8IY82 874 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 CBARPQ8N350 705 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 REPS2Q8NFH8 660 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 FBXO18Q8NFZ0 1043 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 ATL2Q8NHH9 583 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 ZNF384Q8TF68 577 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 STAG1Q8WVM7 1258 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 FUBP3Q96I24 572 aaKnown RBP eCLIP3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 ORAI2Q96SN7 254 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 RNPEPQ9H4A4 650 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 PRDM12Q9H4Q4 367 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 KLHL11Q9NVR0 708 aa3.6□□□□□ -1.83
TOPBP1-205ENST00000506779 hCG_2014768A0A024R1R8 64 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 A0A1B0GTW7 788 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 FZD9O00144 591 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 AKR1B10O60218 316 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 IGLV2-14P01704 120 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 RAP2AP10114 183 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 NCLP19338 710 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ADSLP30566 484 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 EVA1CP58658 441 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 CXADRP78310 365 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 CDK17Q00537 523 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ZNF169Q14929 603 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 INAVAQ3KP66 663 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 METRNLQ641Q3 311 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 FOXR2Q6PJQ5 311 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 FAM180AQ6UWF9 173 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 Q6ZNX1 250 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 TRMT2AQ8IZ69 625 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 TMEM132CQ8N3T6 1108 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 CNTD1Q8N815 330 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ACTRT2Q8TDY3 377 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ZBTB9Q96C00 473 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 EAF2Q96CJ1 260 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 HEPHQ9BQS7 1158 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 ASPSCR1Q9BZE9 553 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 PUS7LQ9H0K6 701 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 TYW1Q9NV66 732 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 MOCS1Q9NZB8 636 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 DPP7Q9UHL4 492 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 EDARQ9UNE0 448 aa3.59□□□□□ -1.83
TOPBP1-205ENST00000506779 KATNA1O75449 491 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ERN1O75460 977 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 GPANK1O95872 356 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ELANEP08246 267 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ATP5JP18859 108 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ECHS1P30084 290 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 PER3P56645 1201 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 CCT2P78371 535 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 SIM1P81133 766 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 OCA2Q04671 838 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 FSCN1Q16658 493 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 BRDTQ58F21 947 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 GJC2Q5T442 439 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 B3GNTL1Q67FW5 361 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ZNF572Q7Z3I7 529 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 CMIPQ8IY22 773 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 OR7D4Q8NG98 312 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 LMBR1Q8WVP7 490 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 RIN2Q8WYP3 895 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 RAX2Q96IS3 184 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 ACAP3Q96P50 834 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 GALNT9Q9HCQ5 603 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 CCM2LQ9NUG4 571 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 C14orf119Q9NWQ9 140 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 SLC5A4Q9NY91 659 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 DMTF1Q9Y222 760 aa3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 MTO1Q9Y2Z2 717 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-205ENST00000506779 TRIM75PA6NK02 468 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 ALG1L2C9J202 215 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 GABRDO14764 452 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 RBMXL2O75526 392 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 POMCP01189 267 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 ENPP1P22413 925 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 FGFR4P22455 802 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 IARSP41252 1262 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 GUCY2FP51841 1108 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 HSD11B2P80365 405 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 SCAPQ12770 1279 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 SP140Q13342 867 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 KLF1Q13351 362 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 FAM50AQ14320 339 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 ABCB5Q2M3G0 1257 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 AKNAD1Q5T1N1 836 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 SYDE2Q5VT97 1194 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 AFMIDQ63HM1 303 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 RUSC1-AS1Q66K80 236 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 ZNF425Q6IV72 752 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 GPR156Q8NFN8 814 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 AHCYL2Q96HN2 611 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 AIFM2Q9BRQ8 373 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 MRI1Q9BV20 369 aa3.57□□□□□ -1.84
TOPBP1-205ENST00000506779 SENP6Q9GZR1 1112 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms