RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 UNC13DQ70J99 1090 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 HASPINQ8TF76 798 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 PPP1R10Q96QC0 940 aaKnown RBP14.29□□□□□ -0.12
TCOF1-209ENST00000506630 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 VN1R3Q9BXE9 311 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 ADAM7Q9H2U9 754 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 RTN4Q9NQC3 1192 aaKnown RBP14.29□□□□□ -0.12
TCOF1-209ENST00000506630 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
TCOF1-209ENST00000506630 SMIM28A0A1B0GU29 152 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 OGTO15294 1046 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 PRPF6O94906 941 aaKnown RBP14.28□□□□□ -0.12
TCOF1-209ENST00000506630 SOD2P04179 222 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 CLTAP09496 248 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 CTSAP10619 480 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 SCN1AP35498 2009 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 MTHFRP42898 656 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 KCNA1Q09470 495 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 NAB2Q15742 525 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 FAM26FQ5R3K3 315 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 ZBTB41Q5SVQ8 909 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 KANK3Q6NY19 840 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 FUT10Q6P4F1 479 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 ALKAL1Q6UXT8 129 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 TMEM105Q8N8V8 129 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 TMEM87AQ8NBN3 555 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 POMGNT1Q8WZA1 660 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 NKD2Q969F2 451 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-209ENST00000506630 HERC2P3Q9BVR0 1158 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 STRA6Q9BX79 667 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 POMKQ9H5K3 350 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 GOLGA2P5Q9HBQ8 144 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 CNTN3Q9P232 1028 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 STK39Q9UEW8 545 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 ADAM28Q9UKQ2 775 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 HCFC2Q9Y5Z7 792 aa14.28□□□□□ -0.12
TCOF1-209ENST00000506630 PTPRZ1P23471 2315 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-209ENST00000506630 A0A0B4J269 797 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 FAM237AA0A1B0GTK4 181 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 C2CD4DB7Z1M9 353 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 TADA2AO75478 443 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 KIF4AO95239 1232 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 CXCL14O95715 111 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 URODP06132 367 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 SLC10A6Q3KNW5 377 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 XKR4Q5GH76 650 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 SLFN12LQ6IEE8 588 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 MRPL43Q8N983 215 aaKnown RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 GLIS3Q8NEA6 775 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 FAM212AQ96EL1 285 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 PAGE5Q96GU1 130 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 ZMAT2Q96NC0 199 aaKnown RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 TMEM206Q9H813 350 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 RPF1Q9H9Y2 349 aaKnown RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 AGO2Q9UKV8 859 aaKnown RBP14.27□□□□□ -0.13
TCOF1-209ENST00000506630 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.13
TCOF1-209ENST00000506630 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCOF1-209ENST00000506630 UBE4BO95155 1302 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 C2CD2LO14523 706 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCOF1-209ENST00000506630 FAM189A1O60320 539 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 KCNE1P15382 129 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 ACOT2P49753 483 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 CLCN5P51795 746 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 CLCNKBP51801 687 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 SOX4Q06945 474 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-209ENST00000506630 SPAG1Q07617 926 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 POSTNQ15063 836 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 ATAT1Q5SQI0 421 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 TDRD5Q8NAT2 981 aaKnown RBP14.26□□□□□ -0.13
TCOF1-209ENST00000506630 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
TCOF1-209ENST00000506630 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 UROC1Q96N76 676 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 EXOC1Q9NV70 894 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 STYXL1Q9Y6J8 313 aa14.26□□□□□ -0.13
TCOF1-209ENST00000506630 USP34Q70CQ2 3546 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 PVALEFA0A1B0GWK0 134 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 TTC26A0AVF1 554 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 KLRC4O43908 158 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 ZNF202O95125 648 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 MYL1P05976 194 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 ID4P47928 161 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 GLUD2P49448 558 aa14.25□□□□□ -0.13
TCOF1-209ENST00000506630 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
TCOF1-209ENST00000506630 EHHADHQ08426 723 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms