RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 UBQLN1Q9UMX0 589 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 C2CD2LO14523 706 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 CLIC2O15247 247 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 NCK2O43639 380 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 URODP06132 367 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 KCNA5P22460 613 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 LRPAP1P30533 357 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 BRCC3P46736 316 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 RTP2Q5QGT7 225 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 EFCAB13Q8IY85 973 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 GPD1LQ8N335 351 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 DDX27Q96GQ7 796 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 KCTD10Q9H3F6 313 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 ASB7Q9H672 318 aa19.81■□□□□ 0.76
PDLIM7-216ENST00000506537 H3BQ06 376 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 I3L4J1 428 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 PPEF2O14830 753 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 LDHAP00338 332 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CNPP09543 421 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CYP3A5P20815 502 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 RPL9P32969 192 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 TMEM132DQ14C87 1099 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 USP41Q3LFD5 358 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 FAM171A1Q5VUB5 890 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 SPATA1Q5VX52 437 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CLEC17AQ6ZS10 378 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 EP400NLQ6ZTU2 488 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CBWD2Q8IUF1 395 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 NOC3LQ8WTT2 800 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 ATXN2LQ8WWM7 1075 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CCDC34Q96HJ3 373 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 FBXL18Q96ME1 805 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 TSPAN18Q96SJ8 248 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 MRPL17Q9NRX2 175 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 RBAKQ9NYW8 714 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 CLEC1BQ9P126 229 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 BARX2Q9UMQ3 279 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 DERAQ9Y315 318 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 C2CD2Q9Y426 696 aa19.8■□□□□ 0.76
PDLIM7-216ENST00000506537 KIAA0391O15091 583 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 PRPF40AO75400 957 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 IL18RAPO95256 599 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 KCNQ1P51787 676 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 UBE2HP62256 183 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 SNRPFP62306 86 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 BMS1Q14692 1282 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 LLGL2Q6P1M3 1020 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 PRSS55Q6UWB4 352 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 HS2ST1Q7LGA3 356 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 C12orf56Q8IXR9 622 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 SPATA20Q8TB22 786 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 RIN2Q8WYP3 895 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 CCDC47Q96A33 483 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 FAM84AQ96KN4 292 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 KLHL5Q96PQ7 755 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 HCFC2Q9Y5Z7 792 aa19.79■□□□□ 0.76
PDLIM7-216ENST00000506537 PLXNA3P51805 1871 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 KINO60870 393 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 FGFR3P22607 806 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 TKTP29401 623 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 NDUFV1P49821 464 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 CYP2J2P51589 502 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 MRPS5P82675 430 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 ELAVL2Q12926 359 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 LEXMQ3ZCV2 418 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 KIAA1841Q6NSI8 718 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 ELOA2Q8IYF1 753 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 SMYD4Q8IYR2 804 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 BEST2Q8NFU1 509 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 MSLNLQ96KJ4 702 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 ASB2Q96Q27 587 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 TTPALQ9BTX7 342 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 RXFP1Q9HBX9 757 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 CGNQ9P2M7 1197 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 MAPK8IP1Q9UQF2 711 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 PCDHA5Q9Y5H7 936 aa19.78■□□□□ 0.76
PDLIM7-216ENST00000506537 FSD2A1L4K1 749 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 TEX28O15482 410 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 XPOTO43592 962 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 CLUL1Q15846 466 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 TMEM184AQ6ZMB5 413 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 CEP57Q86XR8 500 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 GPR65Q8IYL9 337 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 LNX1Q8TBB1 728 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 SLC22A17Q8WUG5 538 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 PIK3R5Q8WYR1 880 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 EMILIN2Q9BXX0 1053 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 PDE11AQ9HCR9 933 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 C5orf42Q9H799 3197 aa19.77■□□□□ 0.76
PDLIM7-216ENST00000506537 PTPRJQ12913 1337 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 ANO9A1A5B4 782 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 EPCAMP16422 314 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 RPL17P18621 184 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 SNRNP35Q16560 246 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 C9orf57Q5W0N0 161 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 GUF1Q8N442 669 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 XXYLT1Q8NBI6 393 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms