RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 TMEM150BA6NC51 233 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 E9PMD0 336 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 TEX28O15482 410 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 SLITRK3O94933 977 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 KIF20AO95235 890 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 GLUD1P00367 558 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 CFHP08603 1231 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 HOXA11P31270 313 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 GBP2P32456 591 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 AFF1P51825 1210 aaKnown RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 UBASH3AP57075 661 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 GSDMDP57764 484 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 STK4Q13043 487 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 UBXN11Q5T124 520 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 KIAA0319Q5VV43 1072 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 CENPPQ6IPU0 288 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 TTI2Q6NXR4 508 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 APTXQ7Z2E3 356 aaKnown RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 GPBP1Q86WP2 473 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 NACC1Q96RE7 527 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 SH2D3AQ9BRG2 576 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 PLEKHA4Q9H4M7 779 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 MARCH5Q9NX47 278 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 LIMA1Q9UHB6 759 aaKnown RBP11.72□□□□□ -0.53
CPNE4-206ENST00000505957 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
CPNE4-206ENST00000505957 STK25O00506 426 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DKC1O60832 514 aaKnown RBP eCLIP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 SERPINC1P01008 464 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 GLUD2P49448 558 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DSG1Q02413 1049 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DSC1Q08554 894 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 ARSHQ5FYA8 562 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 FAM26FQ5R3K3 315 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 KLHL10Q6JEL2 608 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 ZC3H14Q6PJT7 736 aaKnown RBP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 VSTM4Q8IW00 320 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 RSAD2Q8WXG1 361 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 SLC7A3Q8WY07 619 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 BORCS6Q96GS4 357 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 MYADMQ96S97 322 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DHX33Q9H6R0 707 aaKnown RBP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 TBC1D17Q9HA65 648 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 CHST7Q9NS84 486 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 PANK4Q9NVE7 773 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DLGAP2Q9P1A6 1054 aa11.71□□□□□ -0.53
CPNE4-206ENST00000505957 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ANHXE9PGG2 379 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 C2CD2LO14523 706 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ASAP2O43150 1006 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 GAS2O43903 313 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ZNF500O60304 480 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 POMCP01189 267 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 LAMP2P13473 410 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 GAP43P17677 238 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 CDK11BP21127 795 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 RFX1P22670 979 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 AXLP30530 894 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 RFC5P40937 340 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 QARSP47897 775 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 NR1I3Q14994 352 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 BMT2Q1RMZ1 405 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 DYMQ7RTS9 669 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 TAS1R1Q7RTX1 841 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 C4orf19Q8IY42 314 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 DRC7Q8IY82 874 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 CCDC150Q8NCX0 1101 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SMG8Q8ND04 991 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SMG7Q92540 1137 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 RMDN1Q96DB5 314 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 LXNQ9BS40 222 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ZSWIM4Q9H7M6 989 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 MINDY3Q9H8M7 445 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SLC2A4RGQ9NR83 387 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SAMSN1Q9NSI8 373 aaKnown RBP11.7□□□□□ -0.54
CPNE4-206ENST00000505957 INTS13Q9NVM9 706 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ZDHHC7Q9NXF8 308 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 SEL1LQ9UBV2 794 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 ODF2LQ9ULJ1 636 aa11.7□□□□□ -0.54
CPNE4-206ENST00000505957 CA14Q9ULX7 337 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms