RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
SYNE4-207ENST00000505054 NT5C1B-RDH14C9J2C7 533 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 GALTP07902 379 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 CLTAP09496 248 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 CXCL8P10145 99 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 AVPR2P30518 371 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 NUBP1P53384 320 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 YARSP54577 528 aaKnown RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 SLC10A6Q3KNW5 377 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 ELOA2Q8IYF1 753 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 SLC39A11Q8N1S5 342 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 ZSWIM2Q8NEG5 633 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 SPATA20Q8TB22 786 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 BCL7CQ8WUZ0 217 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 NECTIN4Q96NY8 510 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 PPP1R10Q96QC0 940 aaKnown RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 CBWD1Q9BRT8 395 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 TMEM175Q9BSA9 504 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 TOPORSQ9NS56 1045 aaPredicted RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 CNTN3Q9P232 1028 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 CPSF3Q9UKF6 684 aaKnown RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 AGO2Q9UKV8 859 aaKnown RBP18.35■□□□□ 0.53
SYNE4-207ENST00000505054 MYO10Q9HD67 2058 aa18.35■□□□□ 0.53
SYNE4-207ENST00000505054 SMIM28A0A1B0GU29 152 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 GARTP22102 1010 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 SP100P23497 879 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-207ENST00000505054 ITIH3Q06033 890 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 MTMR3Q13615 1198 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 ENOX2Q16206 610 aaKnown RBP18.34■□□□□ 0.53
SYNE4-207ENST00000505054 CES5AQ6NT32 575 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
SYNE4-207ENST00000505054 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 ZMAT2Q96NC0 199 aaKnown RBP18.34■□□□□ 0.53
SYNE4-207ENST00000505054 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
SYNE4-207ENST00000505054 FAM86C1Q9NVL1 165 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 HCFC2Q9Y5Z7 792 aa18.34■□□□□ 0.53
SYNE4-207ENST00000505054 TTC26A0AVF1 554 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 C2orf71A6NGG8 1288 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 THP07101 528 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 KCNE1P15382 129 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 ALDH7A1P49419 539 aaKnown RBP18.33■□□□□ 0.52
SYNE4-207ENST00000505054 ACOT2P49753 483 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 KYAT1Q16773 422 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 CRELD2Q6UXH1 353 aaPredicted RBP18.33■□□□□ 0.52
SYNE4-207ENST00000505054 UBALD2Q8IYN6 164 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 MRPL43Q8N983 215 aaKnown RBP18.33■□□□□ 0.52
SYNE4-207ENST00000505054 KREMEN2Q8NCW0 462 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 ADAM7Q9H2U9 754 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 POMKQ9H5K3 350 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 AGPAT3Q9NRZ7 376 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 CACNG4Q9UBN1 327 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.52
SYNE4-207ENST00000505054 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.52
SYNE4-207ENST00000505054 C2CD4DB7Z1M9 353 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 F8W810 466 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 NRP1O14786 923 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 GFRA3O60609 400 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 SMC2O95347 1197 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 ADRB2P07550 413 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 TUSC3Q13454 348 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
SYNE4-207ENST00000505054 ARMCX5Q6P1M9 558 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 SMARCE1Q969G3 411 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 SAAL1Q96ER3 474 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 IGSF21Q96ID5 467 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 PCIF1Q9H4Z3 704 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 RPF1Q9H9Y2 349 aaKnown RBP18.32■□□□□ 0.52
SYNE4-207ENST00000505054 PLEKHA5Q9HAU0 1116 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 MARCH5Q9NX47 278 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 CDH22Q9UJ99 828 aa18.32■□□□□ 0.52
SYNE4-207ENST00000505054 PRG3Q9Y2Y8 225 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-207ENST00000505054 CFAP54Q96N23 3096 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 CARNS1A5YM72 827 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 CASTOR2A6NHX0 329 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 LACTBL1A8MY62 500 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 CLASP2O75122 1294 aaKnown RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 PDGFBP01127 241 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 MTHFRP42898 656 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 OR1G1P47890 313 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 SOX4Q06945 474 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 SMYD4Q8IYR2 804 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 RABGGTAQ92696 567 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 ATOH1Q92858 354 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-207ENST00000505054 TMEM169Q96HH4 297 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 FAM213AQ9BRX8 229 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 KCTD10Q9H3F6 313 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 DZANK1Q9NVP4 752 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 FAN1Q9Y2M0 1017 aa18.31■□□□□ 0.52
SYNE4-207ENST00000505054 GOLGA8IPA6NC78 632 aa18.3■□□□□ 0.52
SYNE4-207ENST00000505054 GOLGA8JA6NMD2 632 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms