RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 VNN1O95497 513 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 COL6A1P12109 1028 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 FGFR4P22455 802 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 THPOP40225 353 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 APBA1Q02410 837 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 BIRC3Q13489 604 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 TRPC3Q13507 836 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 NCOA4Q13772 614 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 MTF1Q14872 753 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 SLC18A3Q16572 532 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 TOGARAM2Q6ZUX3 1019 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 CDR2LQ86X02 465 aaPredicted RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 FAM71AQ8IYT1 594 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 OR5B17Q8NGF7 314 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 TMEM40Q8WWA1 233 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 SHC3Q92529 594 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 TATDN2Q93075 761 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 PPP1R13BQ96KQ4 1090 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 GDF15Q99988 308 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 IMPG2Q9BZV3 1241 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 TRIM6Q9C030 488 aaPredicted RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 UBE2OQ9C0C9 1292 aaKnown RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 HAUS4Q9H6D7 363 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 STARD7Q9NQZ5 370 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 C1orf112Q9NSG2 853 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 ST3GAL5Q9UNP4 418 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 NOD1Q9Y239 953 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
DDX41-203ENST00000504781 ALPK3Q96L96 1907 aa10.92□□□□□ -0.66
DDX41-203ENST00000504781 A0A1W2PPC1 479 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 SOX1O00570 391 aaPredicted RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 XPOTO43592 962 aaKnown RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 ZNF623O75123 536 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 NPTXRO95502 500 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 CXCL8P10145 99 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 SKIP12755 728 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 TNFAIP3P21580 790 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 PIK3CAP42336 1068 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 KIF11P52732 1056 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 WNT7BP56706 349 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 OSTNP61366 133 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 TFAMQ00059 246 aaKnown RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 ZBTB6Q15916 424 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 ARHGAP44Q17R89 818 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 TRIM71Q2Q1W2 868 aaKnown RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 XKR4Q5GH76 650 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 GJB7Q6PEY0 223 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 ARHGEF19Q8IW93 802 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 HACE1Q8IYU2 909 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 PPM1KQ8N3J5 372 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 CEP120Q8N960 986 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 VRTNQ9H8Y1 702 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 MYO1AQ9UBC5 1043 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 INTUQ9ULD6 942 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 R3HCC1Q9Y3T6 440 aaKnown RBP10.91□□□□□ -0.66
DDX41-203ENST00000504781 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 PCDHA13Q9Y5I0 950 aa10.91□□□□□ -0.66
DDX41-203ENST00000504781 USP27XA6NNY8 438 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 KRT86O43790 486 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 LRRN2O75325 713 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 STAU1O95793 577 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 CD4P01730 458 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 TNNT1P13805 278 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 KCNE1P15382 129 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 BMP8BP34820 402 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 MAGEA1P43355 309 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 YWHAEP62258 255 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 ETF1P62495 437 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 RBP5P82980 135 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ARID5AQ03989 594 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 PTK2Q05397 1052 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 TMEM132DQ14C87 1099 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 NAB2Q15742 525 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 FBXO47Q5MNV8 452 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 DNTTIP2Q5QJE6 756 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 UBXN11Q5T124 520 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 JADE1Q6IE81 842 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ZNF571Q7Z3V5 609 aaPredicted RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 MRPL10Q7Z7H8 261 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 FAM228AQ86W67 206 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 TMEM192Q8IY95 271 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 TTC39CQ8N584 583 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 SLC30A5Q8TAD4 765 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 CAGE1Q8TC20 777 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 KREMEN1Q96MU8 473 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 LBHD1Q9BQE6 289 aaPredicted RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ERVK-5Q9HDB9 667 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms