RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 VSTM1Q6UX27 236 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 SP8Q8IXZ3 490 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 ZBED8Q8IZ13 594 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 CCDC124Q96CT7 223 aaKnown RBP9.13□□□□□ -0.95
CCDC149-204ENST00000504487 TAS2R14Q9NYV8 317 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 GRHL1Q9NZI5 618 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 ATXN10Q9UBB4 475 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 RABGAP1Q9Y3P9 1069 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 PCDHAC2Q9Y5I4 1007 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 ANKRD33BA6NCL7 494 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 HNRNPRO43390 633 aaKnown RBP9.13□□□□□ -0.95
CCDC149-204ENST00000504487 ZBED4O75132 1171 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 CYP11B2P19099 503 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 CHKAP35790 457 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L24Q0WX57 530 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 SLC5A9Q2M3M2 681 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 PODNQ7Z5L7 613 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 LNX1Q8TBB1 728 aaPredicted RBP9.13□□□□□ -0.95
CCDC149-204ENST00000504487 MTBPQ96DY7 904 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 MPP4Q96JB8 637 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 TSSK1BQ9BXA7 367 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
CCDC149-204ENST00000504487 STARD13Q9Y3M8 1113 aa9.13□□□□□ -0.95
CCDC149-204ENST00000504487 KITP10721 976 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 FMO5P49326 533 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 IRX4P78413 519 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 DSTYKQ6XUX3 929 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 CCDC127Q96BQ5 260 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ZNF333Q96JL9 665 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 CLIC5Q9NZA1 410 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 PI4KBQ9UBF8 816 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 DISP2A7MBM2 1401 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ANKRD63C9JTQ0 380 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 FOXN3O00409 490 aaPredicted RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 DDX3YO15523 660 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 CCNB1P14635 433 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 YARSP54577 528 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 RFWD3Q6PCD5 774 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 C4orf50Q6ZRC1 276 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 CLMNQ96JQ2 1002 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 TMEM109Q9BVC6 243 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 SENP1Q9P0U3 644 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 WHRNQ9P202 907 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 APEX2Q9UBZ4 518 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 PCYOX1Q9UHG3 505 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 TMCC1O94876 653 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 KRT4P19013 534 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 PSMC4P43686 418 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 INHBEP58166 350 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 MTM1Q13496 603 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 RABGAP1LQ5R372 815 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 UBAP2Q5T6F2 1119 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 SLFN11Q7Z7L1 901 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 SLC25A41Q8N5S1 370 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 PYROXD1Q8WU10 500 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 ART4Q93070 314 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 REEP2Q9BRK0 252 aa9.12□□□□□ -0.95
CCDC149-204ENST00000504487 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 DDX18Q9NVP1 670 aaKnown RBP9.12□□□□□ -0.95
CCDC149-204ENST00000504487 TESPA1A2RU30 521 aaPredicted RBP9.11□□□□□ -0.95
CCDC149-204ENST00000504487 DKC1O60832 514 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC149-204ENST00000504487 FOXN2P32314 431 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 GCLMP48507 274 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 BTKQ06187 659 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 CCDC15Q0P6D6 951 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 ASPHQ12797 758 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 PPP2R5CQ13362 524 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 P3H1Q32P28 736 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 C12orf60Q5U649 245 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 TTC27Q6P3X3 843 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 ISLR2Q6UXK2 745 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 CENPUQ71F23 418 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 ANKMY2Q8IV38 441 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 SLFN12Q8IYM2 578 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 SLC30A5Q8TAD4 765 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 SLC20A1Q8WUM9 679 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 Q9H521 79 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 PREBQ9HCU5 417 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 PDE4DIPQ5VU43 2346 aa9.11□□□□□ -0.95
CCDC149-204ENST00000504487 USP17L10C9JJH3 530 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms