RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ITGA11Q9UKX5 1188 aa14.95□□□□□ -0.02
CYSTM1-202ENST00000504227 HLA-DRAP01903 254 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 ZNF75DP51815 510 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 AFF1P51825 1210 aaKnown RBP14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 RBP5P82980 135 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 NCOA4Q13772 614 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 EXOC3L4Q17RC7 722 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 FAM117BQ6P1L5 589 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 CCDC150Q8NCX0 1101 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 EHBP1Q8NDI1 1231 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 FBXL13Q8NEE6 735 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 PHOSPHO2Q8TCD6 241 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 FAM84AQ96KN4 292 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 PCMTD1Q96MG8 357 aaPredicted RBP14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 CASD1Q96PB1 797 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 FAM193BQ96PV7 902 aaPredicted RBP14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 ZBED2Q9BTP6 218 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 MRPL9Q9BYD2 267 aaKnown RBP14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 PLAGL2Q9UPG8 496 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 COQ4Q9Y3A0 265 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 LTBP2Q14767 1821 aa14.94□□□□□ -0.02
CYSTM1-202ENST00000504227 A0A1W2PQC6 194 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 H0YGN5 161 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 CAPN15O75808 1086 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 DGKIO75912 1065 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 ADCY5O95622 1261 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 KRT19P08727 400 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 RPL9P32969 192 aaKnown RBP14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 PIK3CAP42336 1068 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 GATMP50440 423 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 GUCY2FP51841 1108 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 TUSC3Q13454 348 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 WDR44Q5JSH3 913 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 C1orf127Q8N9H9 656 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 TAS1R2Q8TE23 839 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 ERGIC2Q96RQ1 377 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 SLC9A7Q96T83 725 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 UBE2OQ9C0C9 1292 aaKnown RBP14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 TBC1D13Q9NVG8 400 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 RAB20Q9NX57 234 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 CXXC1Q9P0U4 656 aaPredicted RBP14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 GCNT4Q9P109 453 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 AGAP1Q9UPQ3 857 aa14.93□□□□□ -0.02
CYSTM1-202ENST00000504227 VNN1O95497 513 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 CST3P01034 146 aaPredicted RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 ITGB3P05106 788 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 ATP2A2P16615 1042 aaKnown RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 POLR2BP30876 1174 aaKnown RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 SOX4Q06945 474 aaPredicted RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 SYCP1Q15431 976 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 PAN2Q504Q3 1202 aaKnown RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 EPC2Q52LR7 807 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 C9orf57Q5W0N0 161 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 TAF4BQ92750 862 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 MRFAP1L1Q96HT8 127 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 UROC1Q96N76 676 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 YME1L1Q96TA2 773 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 IMPG2Q9BZV3 1241 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 INTS2Q9H0H0 1204 aaKnown RBP14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 SIX4Q9UIU6 781 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 ANK1P16157 1881 aa14.92□□□□□ -0.02
CYSTM1-202ENST00000504227 PDE4DIPQ5VU43 2346 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 ANO9A1A5B4 782 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 CLSTN1O94985 981 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 GJB5O95377 273 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 SLC9A1P19634 815 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 PON1P27169 355 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 LRPAP1P30533 357 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 ATICP31939 592 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 PNPLA4P41247 253 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 MYL6P60660 151 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 MYO1EQ12965 1108 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 NAB2Q15742 525 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 RASIP1Q5U651 963 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 TMCO2Q7Z6W1 182 aaPredicted RBP14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 ZNF280BQ86YH2 543 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 HERC6Q8IVU3 1022 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 CMTR2Q8IYT2 770 aaKnown RBP14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 LRRC43Q8N309 656 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 LRRC52Q8N7C0 313 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 SEMA4DQ92854 862 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 ZNF689Q96CS4 500 aaPredicted RBP14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 RNPC3Q96LT9 517 aaKnown RBP14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 GDF15Q99988 308 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 LSM14BQ9BX40 385 aaKnown RBP14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 GOLGA2P5Q9HBQ8 144 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 SIK3Q9Y2K2 1263 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 INSL6Q9Y581 213 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 RALGAPA2Q2PPJ7 1873 aa14.91□□□□□ -0.02
CYSTM1-202ENST00000504227 CASTOR2A6NHX0 329 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 PODXLO00592 558 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 ZC3H11AO75152 810 aaKnown RBP eCLIP14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 DDHD2O94830 711 aa14.9□□□□□ -0.02
CYSTM1-202ENST00000504227 ALDH2P05091 517 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms