RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DDX5P17844 614 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PDIA3P30101 505 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CHRNA5P30532 468 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ADORA1P30542 326 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC26A3P40879 764 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CD86P42081 329 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 GYG1P46976 350 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 HCAR3P49019 387 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 RPIAP49247 311 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 COPAP53621 1224 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 JAM2P57087 298 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MYL6P60660 151 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 COG7P83436 770 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PDCLQ13371 301 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SNTA1Q13424 505 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MORC3Q14149 939 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 NFIXQ14938 502 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MUM1Q2TAK8 710 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TCP11X2Q5H9J9 407 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 DENND2CQ68D51 928 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP4F22Q6NT55 531 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF654Q8IZM8 581 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 RNF10Q8N5U6 811 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF784Q8NCA9 323 aaPredicted RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 OR7G1Q8NGA0 311 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CFAP61Q8NHU2 1237 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MYCBPAPQ8TBZ2 947 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 HELQQ8TDG4 1101 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 TGFBRAP1Q8WUH2 860 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SCG3Q8WXD2 468 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 FOXJ1Q92949 421 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF653Q96CK0 615 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 GPR101Q96P66 508 aaPredicted RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 C19orf43Q9BQ61 176 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 PIF1Q9H611 641 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 NRDE2Q9H7Z3 1164 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 MRPL44Q9H9J2 332 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 METTL5Q9NRN9 209 aaKnown RBP3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 CDC23Q9UJX2 597 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC4A7Q9Y6M7 1214 aa3.9□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF646O15015 1829 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC12A8A0AV02 714 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 POTEFA5A3E0 1075 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KMOO15229 486 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PI15O43692 258 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CIB2O75838 187 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 C7P10643 843 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ZFXP17010 805 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ATF7P17544 494 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 MX2P20592 715 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PCSK6P29122 969 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 BMPR1AP36894 532 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 BCAMP50895 628 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 DRP2Q13474 957 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CCINQ13939 588 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SEPT6Q14141 434 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SKIV2LQ15477 1246 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIP13Q15645 432 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CNNM4Q6P4Q7 775 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LIMS2Q7Z4I7 341 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SCYL3Q8IZE3 742 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CHCHD4Q8N4Q1 142 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NAT8LQ8N9F0 302 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 HIPK4Q8NE63 616 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TNIP2Q8NFZ5 429 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF473Q8WTR7 871 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 BCL7CQ8WUZ0 217 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PRCCQ92733 491 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 MED30Q96HR3 178 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NSMCE3Q96MG7 304 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 FERMT1Q9BQL6 677 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 UQCC2Q9BRT2 126 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LLPHQ9BRT6 129 aaKnown RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF341Q9BYN7 854 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 WASH6PQ9NQA3 447 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP26B1Q9NR63 512 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 BABAM1Q9NWV8 329 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF112Q9UJU3 913 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LEMD3Q9Y2U8 911 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHGA3Q9Y5H0 932 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KLF2Q9Y5W3 355 aaPredicted RBP3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 RFX7Q2KHR2 1363 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 LTBP1Q14766 1721 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ESYT3A0FGR9 886 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC162PA2VCL2 907 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 ARHGEF35A5YM69 484 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SOBPA7XYQ1 873 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 DIAPH2O60879 1101 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 SMIM24O75264 130 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP3A4P08684 503 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KRT19P08727 400 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 POTEIP0CG38 1075 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 CPB1P15086 417 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 POLE2P56282 527 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 KLC1Q07866 573 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 RCN2Q14257 317 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 MESDQ14696 234 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 TCEAL1Q15170 157 aa3.89□□□□□ -1.79
PCDH11X-208ENST00000504220 NONOQ15233 471 aaKnown RBP eCLIP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms