RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 RAB24Q969Q5 203 aa5.43□□□□□ -1.54
SUB1-204ENST00000504016 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
SUB1-204ENST00000504016 NOX1Q9Y5S8 564 aa5.43□□□□□ -1.54
SUB1-204ENST00000504016 FZD9O00144 591 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 NDUFS2O75306 463 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 ELLP55199 621 aaPredicted RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 PPP3CAQ08209 521 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 COLEC12Q5KU26 742 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 Q6ZVL8 140 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 MED25Q71SY5 747 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 MAPKAPK5Q8IW41 473 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 BOLLQ8N9W6 283 aaKnown RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 OR2I1PQ8NGU4 316 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 CAGE1Q8TC20 777 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 TEKT5Q96M29 485 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 UHRF1Q96T88 793 aaPredicted RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 REXO4Q9GZR2 422 aaKnown RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 GREM2Q9H772 168 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 AASDHPPTQ9NRN7 309 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 KLHL11Q9NVR0 708 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 TUBD1Q9UJT1 453 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 TLK1Q9UKI8 766 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 MRFAP1Q9Y605 127 aa5.42□□□□□ -1.54
SUB1-204ENST00000504016 COL11A2P13942 1736 aaPredicted RBP5.42□□□□□ -1.54
SUB1-204ENST00000504016 TRIM75PA6NK02 468 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 PDGFRBP09619 1106 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 FDXRP22570 491 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 MCAMP43121 646 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 EXOSC10Q01780 885 aaKnown RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 MALLQ13021 153 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 MST1LQ2TV78 715 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 EFCAB2Q5VUJ9 269 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 FAM180AQ6UWF9 173 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 ZNF572Q7Z3I7 529 aaPredicted RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 ZBTB46Q86UZ6 589 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 TRMT2AQ8IZ69 625 aaKnown RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 TMEM132CQ8N3T6 1108 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 OR7D4Q8NG98 312 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 CCHCR1Q8TD31 782 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 ALOXE3Q9BYJ1 711 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 ZNF277Q9NRM2 450 aaPredicted RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 RBM12Q9NTZ6 932 aaKnown RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 PCDHA13Q9Y5I0 950 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 POLR2AP24928 1970 aaKnown RBP5.41□□□□□ -1.54
SUB1-204ENST00000504016 MAST3O60307 1309 aa5.41□□□□□ -1.54
SUB1-204ENST00000504016 WNT10BO00744 389 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 PPM1GO15355 546 aaPredicted RBP5.4□□□□□ -1.54
SUB1-204ENST00000504016 ALDH1L1O75891 902 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
SUB1-204ENST00000504016 ELANEP08246 267 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 SEPT2Q15019 361 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 GPR149Q86SP6 731 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.4□□□□□ -1.54
SUB1-204ENST00000504016 RNF31Q96EP0 1072 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 Q96MF0 132 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 DUSP26Q9BV47 211 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 SPATA5L1Q9BVQ7 753 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 BCO1Q9HAY6 547 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 KIAA1586Q9HCI6 787 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 IP6K2Q9UHH9 426 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 SCOCQ9UIL1 159 aa5.4□□□□□ -1.54
SUB1-204ENST00000504016 LUC7L2Q9Y383 392 aaKnown RBP5.4□□□□□ -1.54
SUB1-204ENST00000504016 PNPLA7Q6ZV29 1317 aa5.4□□□□□ -1.55
SUB1-204ENST00000504016 C1RP00736 705 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 CDK4P11802 303 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 ECHS1P30084 290 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
SUB1-204ENST00000504016 UAP1L1Q3KQV9 507 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 B3GNTL1Q67FW5 361 aaPredicted RBP5.39□□□□□ -1.55
SUB1-204ENST00000504016 RHOT1Q8IXI2 618 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 RAVER1Q8IY67 606 aaKnown RBP5.39□□□□□ -1.55
SUB1-204ENST00000504016 DRC7Q8IY82 874 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 HOOK2Q96ED9 719 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 ZSWIM1Q9BR11 485 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 LRFN3Q9BTN0 628 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 SERPINB13Q9UIV8 391 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
SUB1-204ENST00000504016 A0A1B0GTW7 788 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 POMCP01189 267 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 RAP2AP10114 183 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 ALOX15P16050 662 aaPredicted RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 NEK2P51955 445 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 SCAPQ12770 1279 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 SP140Q13342 867 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 IL10RAQ13651 578 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 TTF1Q15361 905 aaPredicted RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 ANO4Q32M45 955 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 AFMIDQ63HM1 303 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 Q6ZNX1 250 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 FAM98AQ8NCA5 519 aaKnown RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 KAT5Q92993 513 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 SENP6Q9GZR1 1112 aaPredicted RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 RNPEPQ9H4A4 650 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 TBCCD1Q9NVR7 557 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms