RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 SPTBN5Q9NRC6 3674 aaKnown RBP22.44■■□□□ 1.18
PDGFRA-203ENST00000503856 SSX2IPQ9Y2D8 614 aa22.44■■□□□ 1.18
PDGFRA-203ENST00000503856 HCFC2Q9Y5Z7 792 aa22.44■■□□□ 1.18
PDGFRA-203ENST00000503856 UBE4BO95155 1302 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 LDHAP00338 332 aaKnown RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 RPN1P04843 607 aaKnown RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 BRCC3P46736 316 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 ELAVL2Q12926 359 aaKnown RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 STK4Q13043 487 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 SNW1Q13573 536 aaKnown RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 RTP2Q5QGT7 225 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 TMEM184AQ6ZMB5 413 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 CD302Q8IX05 232 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 ENGASEQ8NFI3 743 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 RIN2Q8WYP3 895 aaPredicted RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 UBQLN1Q9UMX0 589 aaKnown RBP22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 TTC28Q96AY4 2481 aa22.43■■□□□ 1.18
PDGFRA-203ENST00000503856 GOLGA8IPA6NC78 632 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 GOLGA8JA6NMD2 632 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 I3L4J1 428 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 TGFB1I1O43294 461 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 KLRC2P26717 231 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 GUCY2FP51841 1108 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 POU5F1Q01860 360 aaKnown RBP22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 DPYDQ12882 1025 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 PSMD2Q13200 908 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 PTCRAQ6ISU1 281 aaPredicted RBP22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 CEP57Q86XR8 500 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 KIAA0895Q8NCT3 520 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 NOC3LQ8WTT2 800 aaKnown RBP22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 SLC22A17Q8WUG5 538 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 TSPAN18Q96SJ8 248 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 TTPALQ9BTX7 342 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 ASB7Q9H672 318 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 RXFP1Q9HBX9 757 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 CD207Q9UJ71 328 aa22.42■■□□□ 1.18
PDGFRA-203ENST00000503856 TEX28O15482 410 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 XPOTO43592 962 aaKnown RBP22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 NFICP08651 508 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 EPCAMP16422 314 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 CYP3A5P20815 502 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 FAM160A1Q05DH4 1040 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 TMEM132DQ14C87 1099 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 BMT2Q1RMZ1 405 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 KANK3Q6NY19 840 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 PRSS55Q6UWB4 352 aaPredicted RBP22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 GPR65Q8IYL9 337 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 CASP10Q92851 521 aa22.41■■□□□ 1.18
PDGFRA-203ENST00000503856 GRXCR2A6NFK2 248 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 CLIC2O15247 247 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 TRAPPC3O43617 180 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 EXTL3O43909 919 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 GADD45BO75293 160 aaPredicted RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 IL18RAPO95256 599 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 SRGAP2BP0DMP2 458 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 IL9P15248 144 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 RPL17P18621 184 aaKnown RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 FGFR3P22607 806 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 LRPAP1P30533 357 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 WNT7BP56706 349 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 KNOP1Q1ED39 458 aaKnown RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 PUS10Q3MIT2 529 aaKnown RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 SPATA1Q5VX52 437 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 ANKRD54Q6NXT1 300 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 PPFIBP1Q86W92 1011 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 BRSK2Q8IWQ3 736 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 GPD1LQ8N335 351 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 BEST2Q8NFU1 509 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 AGPAT3Q9NRZ7 376 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 DERAQ9Y315 318 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 NUB1Q9Y5A7 615 aa22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.4■■□□□ 1.18
PDGFRA-203ENST00000503856 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 KIAA0391O15091 583 aaKnown RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 MBTPS2O43462 519 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 RHOBTB3O94955 611 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 ADH1AP07327 375 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 CLCN4P51793 760 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 SYCE2Q6PIF2 218 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 GLYCTKQ8IVS8 523 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 SMRP1Q8NCR6 262 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 LNX1Q8TBB1 728 aaPredicted RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 ADAMTS19Q8TE59 1207 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 PIK3R5Q8WYR1 880 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 CCDC47Q96A33 483 aaKnown RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 CCDC34Q96HJ3 373 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 COL25A1Q9BXS0 654 aaPredicted RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 RBAKQ9NYW8 714 aaPredicted RBP22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 HSPBP1Q9NZL4 362 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 FNIP2Q9P278 1114 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 C2CD2Q9Y426 696 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 CUL9Q8IWT3 2517 aa22.39■■□□□ 1.17
PDGFRA-203ENST00000503856 TKTP29401 623 aaKnown RBP22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 SMAD4Q13485 552 aaKnown RBP22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 PNOCQ13519 176 aa22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 PSMD5Q16401 504 aa22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 HS2ST1Q7LGA3 356 aa22.38■■□□□ 1.17
PDGFRA-203ENST00000503856 EFCAB13Q8IY85 973 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms