RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 FAM81BQ96LP2 452 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 SPATA33Q96N06 139 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 RBAKQ9NYW8 714 aaPredicted RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 H3BQF6 201 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 HLA-DRAP01903 254 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 MMEP08473 750 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 CYP2C8P10632 490 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 FOSL1P15407 271 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 PDE6CP51160 858 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 GPC5P78333 572 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 CDR2Q01850 454 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 CCDC15Q0P6D6 951 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 GPS2Q13227 327 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 ZBTB41Q5SVQ8 909 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 RASGEF1CQ8N431 466 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 PHC3Q8NDX5 983 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 GTF3C2Q8WUA4 911 aaPredicted RBP12.4□□□□□ -0.42
USP46-204ENST00000503060 TCP11Q8WWU5 503 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 COPS5Q92905 334 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 KRT12Q99456 494 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
USP46-204ENST00000503060 PTPRJQ12913 1337 aa12.4□□□□□ -0.43
USP46-204ENST00000503060 ADGRA2Q96PE1 1338 aa12.4□□□□□ -0.43
USP46-204ENST00000503060 IGKV6-21A0A0C4DH24 114 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 ZBTB42B2RXF5 422 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 GAS2O43903 313 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 TNFRSF8P28908 595 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 CLK1P49759 484 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 EFNA5P52803 228 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 TDRD10Q5VZ19 366 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP46-204ENST00000503060 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 ASB14A6NK59 587 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 POLR3GO15318 223 aaPredicted RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 DDX3YO15523 660 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 KRT5P13647 590 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 RRM1P23921 792 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 BIRC3Q13489 604 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 TTLL4Q14679 1199 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 TERF2Q15554 542 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 CDCA2Q69YH5 1023 aaPredicted RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 SVIPQ8NHG7 77 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
USP46-204ENST00000503060 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 PDGFCQ9NRA1 345 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 SCN4AP35499 1836 aa12.39□□□□□ -0.43
USP46-204ENST00000503060 ZNFX1Q9P2E3 1918 aaKnown RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 MSCO60682 206 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 CAPN15O75808 1086 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 TPPPO94811 219 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 VNN1O95497 513 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 MXD4Q14582 209 aaPredicted RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 C11orf63Q6NUN7 778 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 LRRC71Q8N4P6 559 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 GPRC5AQ8NFJ5 357 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 GDF3Q9NR23 364 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 HPCAL4Q9UM19 191 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 MCM3APO60318 1980 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 GLI1P08151 1106 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 HARSP12081 509 aaKnown RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 MAGEA8P43361 318 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 SLC26A2P50443 739 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 ZNF132P52740 706 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 IFT20Q8IY31 132 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 GIPC2Q8TF65 315 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 GDAP1L1Q96MZ0 367 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 JPH2Q9BR39 696 aaPredicted RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 ZCCHC17Q9NP64 241 aaKnown RBP12.38□□□□□ -0.43
USP46-204ENST00000503060 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
USP46-204ENST00000503060 USTQ9Y2C2 406 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms