RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 XYLBO75191 536 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 TADA2AO75478 443 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 ZMYND10O75800 440 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CLSTN1O94985 981 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 C22orf31O95567 290 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 C8AP07357 584 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SKIP12755 728 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 RPS6KB1P23443 525 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 RDXP35241 583 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 PLA2G4AP47712 749 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SOX9P48436 509 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CLK2P49760 499 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 CORO7P57737 925 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SIM1P81133 766 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 FZD5Q13467 585 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 PABPC1LQ4VXU2 614 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 HSP90B2PQ58FF3 399 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 TANGO2Q6ICL3 276 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 PPP1R18Q6NYC8 613 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 MIS18BP1Q6P0N0 1132 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SYT10Q6XYQ8 523 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SYNE3Q6ZMZ3 975 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CATSPER4Q7RTX7 472 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 HEATR3Q7Z4Q2 680 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CCDC60Q8IWA6 550 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 YAF2Q8IY57 180 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 C17orf53Q8N3J3 647 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 CHCHD4Q8N4Q1 142 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CCDC82Q8N4S0 544 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 ZNF713Q8N859 430 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 SLC7A14Q8TBB6 771 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 FAM71BQ8TC56 605 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CSGALNACT1Q8TDX6 532 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 HASPINQ8TF76 798 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CACTINQ8WUQ7 758 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 CRYGNQ8WXF5 182 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 GOLGA1Q92805 767 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 SPATA32Q96LK8 384 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 NLRP4Q96MN2 994 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 JAKMIP1Q96N16 626 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 HERC2P3Q9BVR0 1158 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 TRMT61BQ9BVS5 477 aaKnown RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 TMEM121BQ9BXQ6 578 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 GCOM2Q9BZD3 368 aaPredicted RBP5.66□□□□□ -1.5
HTT-202ENST00000502820 SLC32A1Q9H598 525 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 VPS45Q9NRW7 570 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 FAM105AQ9NUU6 356 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 ZNF446Q9NWS9 450 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 BARHL2Q9NY43 387 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 PCDHA6Q9UN73 950 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 GPSM3Q9Y4H4 160 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 CYP46A1Q9Y6A2 500 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 OTOGLQ3ZCN5 2332 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 KIAA1671Q9BY89 1806 aa5.66□□□□□ -1.5
HTT-202ENST00000502820 FAM208BQ5VWN6 2430 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 A0A087WZ62 844 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 CARNS1A5YM72 827 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 SLC38A8A6NNN8 435 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 IKBKBO14920 756 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 ZNF263O14978 683 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 DCLK1O15075 740 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 ARHGAP6O43182 974 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 FOSP01100 380 aaPredicted RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 TDGF1P13385 188 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 CEACAM1P13688 526 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 DARSP14868 501 aaKnown RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 GJB2P29033 226 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 OAS2P29728 719 aaKnown RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 ADD1P35611 737 aaKnown RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 SREBF1P36956 1147 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 SLC26A2P50443 739 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 GPC3P51654 580 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 NAPAP54920 295 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 SCAPQ12770 1279 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 LRRC32Q14392 662 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 GAS6Q14393 721 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 IQCB1Q15051 598 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 NTRK3Q16288 839 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 PFKFB3Q16875 520 aaPredicted RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 MAP9Q49MG5 647 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 CC2D1AQ6P1N0 951 aaPredicted RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 BLOC1S2Q6QNY1 142 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 CCDC73Q6ZRK6 1079 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 HDXQ7Z353 690 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 ZNF598Q86UK7 904 aaKnown RBP5.65□□□□□ -1.5
HTT-202ENST00000502820 LUZP1Q86V48 1076 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 TTC30AQ86WT1 665 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 PROSER1Q86XN7 944 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 RHPN2Q8IUC4 686 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 NPAS3Q8IXF0 933 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 SPEM1Q8N4L4 309 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 CEP112Q8N8E3 955 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 GLIS3Q8NEA6 775 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 ANKRD20A12PQ8NF67 263 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 MDM1Q8TC05 714 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 ZNF592Q92610 1267 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 BRF1Q92994 677 aa5.65□□□□□ -1.5
HTT-202ENST00000502820 PPP1R13BQ96KQ4 1090 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms