RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ETAA1Q9NY74 926 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 H3BRJ5 948 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 P4HA2O15460 535 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 KLHL2O95198 593 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 PYGBP11216 843 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 CALB2P22676 271 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 SPOPLQ6IQ16 392 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 LRRC43Q8N309 656 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 KCTD17Q8N5Z5 321 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 DNAAF3Q8N9W5 541 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 ACAP3Q96P50 834 aa18.17■□□□□ 0.5
HMGXB3-201ENST00000502717 TBXAS1P24557 533 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 HEY2Q9UBP5 337 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 DRD4P21917 467 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 AP1B1Q10567 949 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 SURF1Q15526 300 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 TBCCQ15814 346 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 TMCO4Q5TGY1 634 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 GJB7Q6PEY0 223 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 RSPH3Q86UC2 560 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 ADAM33Q9BZ11 813 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 NACA2Q9H009 215 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 GTF3C4Q9UKN8 822 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 SIK3Q9Y2K2 1263 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 UBE4BO95155 1302 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 DNAJC6O75061 913 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 GNA15P30679 374 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 IFI35P80217 286 aaPredicted RBP18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 TAP1Q03518 808 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 OCA2Q04671 838 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 IRGCQ6NXR0 463 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 SMAPO00193 183 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 SLC16A4O15374 487 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 ARL4AP40617 200 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 MRPL46Q9H2W6 279 aaKnown RBP18.16■□□□□ 0.5
HMGXB3-201ENST00000502717 SNX3O60493 162 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 POTEAQ6S8J7 498 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 SLC30A5Q8TAD4 765 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 PRPF31Q8WWY3 499 aaKnown RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 HDAC11Q96DB2 347 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 CHCHD3Q9NX63 227 aaKnown RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 HOXD10P28358 340 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 HNRNPH3P31942 346 aaKnown RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 STX3Q13277 289 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 PRPSAP1Q14558 356 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 C21orf2O43822 256 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 ATP9AO75110 1047 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 IFRD2Q12894 506 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 MDH1BQ5I0G3 518 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 OR6B2Q6IFH4 312 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 ABCF3Q9NUQ8 709 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 MEGF6O75095 1541 aa18.15■□□□□ 0.5
HMGXB3-201ENST00000502717 GDF11O95390 407 aa18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 CASP7P55210 303 aa18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 GEMIN4P57678 1058 aaKnown RBP18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 XRCC4Q13426 336 aa18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 CCNYQ8ND76 341 aa18.14■□□□□ 0.5
HMGXB3-201ENST00000502717 AHCYL1O43865 530 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 MGEA5O60502 916 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 RPA1P27694 616 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 TFAMQ00059 246 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 TAF1BQ53T94 588 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 CORO1CQ9ULV4 474 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 SPAG6O75602 509 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 P4HBP07237 508 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 MRPS9P82933 396 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 MKRN4PQ13434 485 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 VPS72Q15906 364 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 ASNSD1Q9NWL6 643 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 NXF1Q9UBU9 619 aaKnown RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 MST1RQ04912 1400 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 CYP11B2P19099 503 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 ZNF200P98182 395 aaPredicted RBP18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 UBXN6Q9BZV1 441 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 TMEM117Q9H0C3 514 aa18.14■□□□□ 0.49
HMGXB3-201ENST00000502717 ZCCHC18P0CG32 403 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 SNAP25P60880 206 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 ROR1Q01973 937 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 C3orf62Q6ZUJ4 267 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 HAUS6Q7Z4H7 955 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 ARHGAP22Q7Z5H3 698 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 HSD3B7Q9H2F3 369 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 RNPEPL1Q9HAU8 725 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 RGL1Q9NZL6 768 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 KRT4P19013 534 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 EPHA7Q15375 998 aa18.13■□□□□ 0.49
HMGXB3-201ENST00000502717 SNX30Q5VWJ9 437 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms